RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 TAL1P17542 331 aaPredicted RBP11.26□□□□□ -0.61
CHD8-204ENST00000553622 NLRP5P59047 1200 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
CHD8-204ENST00000553622 PLS1Q14651 629 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 WWC2Q6AWC2 1192 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 CYP4F22Q6NT55 531 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 FBXO11Q86XK2 927 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 BRI3BPQ8WY22 251 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 COA7Q96BR5 231 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 ASCC2Q9H1I8 757 aaPredicted RBP11.26□□□□□ -0.61
CHD8-204ENST00000553622 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 KCNJ14Q9UNX9 436 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 MYH7BA7E2Y1 1941 aa11.26□□□□□ -0.61
CHD8-204ENST00000553622 MANSC4A6NHS7 340 aaPredicted RBP11.25□□□□□ -0.61
CHD8-204ENST00000553622 BTBD19C9JJ37 291 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 STXBP3O00186 592 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 PDHXO00330 501 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 DSG3P32926 999 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 MOGSQ13724 837 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 PKP1Q13835 747 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 SAFBQ15424 915 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHD8-204ENST00000553622 DEFB115Q30KQ5 88 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 KRT40Q6A162 431 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 GPAT2Q6NUI2 795 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 CCDC148Q8NFR7 591 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
CHD8-204ENST00000553622 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 PAGR1Q9BTK6 254 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 AMNQ9BXJ7 453 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
CHD8-204ENST00000553622 RAVER2Q9HCJ3 691 aaKnown RBP11.25□□□□□ -0.61
CHD8-204ENST00000553622 HOMER2Q9NSB8 354 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 HOXC10Q9NYD6 342 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 CHMP5Q9NZZ3 219 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 CCPG1Q9ULG6 757 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 PCDHA1Q9Y5I3 950 aa11.25□□□□□ -0.61
CHD8-204ENST00000553622 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
CHD8-204ENST00000553622 VWA5AO00534 786 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 PPP1R11O60927 126 aaPredicted RBP11.24□□□□□ -0.61
CHD8-204ENST00000553622 ALAS1P13196 640 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 HOXA7P31268 230 aaPredicted RBP11.24□□□□□ -0.61
CHD8-204ENST00000553622 NUCB2P80303 420 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 FERMT3Q86UX7 667 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 SMCR8Q8TEV9 937 aaPredicted RBP11.24□□□□□ -0.61
CHD8-204ENST00000553622 HHIPL1Q96JK4 782 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 CAPNS2Q96L46 248 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 AGBL1Q96MI9 1066 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 P2RX7Q99572 595 aaKnown RBP11.24□□□□□ -0.61
CHD8-204ENST00000553622 BRMS1Q9HCU9 246 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 BARHL2Q9NY43 387 aa11.24□□□□□ -0.61
CHD8-204ENST00000553622 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
CHD8-204ENST00000553622 WDR33Q9C0J8 1336 aaKnown RBP11.24□□□□□ -0.61
CHD8-204ENST00000553622 PLXNB2O15031 1838 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 SMCO2A6NFE2 343 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 FAM155AB1AL88 458 aaPredicted RBP11.23□□□□□ -0.61
CHD8-204ENST00000553622 hCG_1984214I3L0E3 225 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 ICAM1P05362 532 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 ZSCAN22P10073 491 aaPredicted RBP11.23□□□□□ -0.61
CHD8-204ENST00000553622 CYP2C8P10632 490 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 DDIT3P35638 169 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 KRT2P35908 639 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 ADCY7P51828 1080 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 HERVK_113P62684 666 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 HTRA3P83110 453 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 SREBF2Q12772 1141 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 TRAF1Q13077 416 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 FOXD4L6Q3SYB3 417 aaPredicted RBP11.23□□□□□ -0.61
CHD8-204ENST00000553622 SNRNP48Q6IEG0 339 aaKnown RBP11.23□□□□□ -0.61
CHD8-204ENST00000553622 FOXD4L3Q6VB84 417 aaPredicted RBP11.23□□□□□ -0.61
CHD8-204ENST00000553622 ANKRD23Q86SG2 305 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 FAM43AQ8N2R8 423 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 ZNF713Q8N859 430 aaPredicted RBP11.23□□□□□ -0.61
CHD8-204ENST00000553622 PARK7Q99497 189 aaKnown RBP11.23□□□□□ -0.61
CHD8-204ENST00000553622 SLC38A10Q9HBR0 1119 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 SH3GLB2Q9NR46 395 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 MTMR6Q9Y217 621 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 MGAMO43451 1857 aa11.23□□□□□ -0.61
CHD8-204ENST00000553622 PEX10O60683 326 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 AOC2O75106 756 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 ABCB11O95342 1321 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 MMP1P03956 469 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 FDX1P10109 184 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 CALML3P27482 149 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 KIF23Q02241 960 aaPredicted RBP11.22□□□□□ -0.61
CHD8-204ENST00000553622 TYW1BQ6NUM6 668 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 PPP1R18Q6NYC8 613 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 DOCK3Q8IZD9 2030 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 SHISA4Q96DD7 197 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 PTPN18Q99952 460 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 PHF20Q9BVI0 1012 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
CHD8-204ENST00000553622 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
CHD8-204ENST00000553622 ZNF536O15090 1300 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 RASSF10A6NK89 507 aa11.21□□□□□ -0.61
CHD8-204ENST00000553622 IGF2BP3O00425 579 aaKnown RBP eCLIP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms