RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ZBTB7AO95365 584 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 ZFYP08048 801 aaPredicted RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 HIBADHP31937 336 aaKnown RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 MFAP1P55081 439 aaKnown RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 ELOAQ14241 798 aaKnown RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 SPTY2D1Q68D10 685 aaPredicted RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 TMED8Q6PL24 325 aaPredicted RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 KIAA1211Q6ZU35 1233 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 ZNF804AQ7Z570 1209 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 WFDC8Q8IUA0 241 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 RTKN2Q8IZC4 609 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 DTWD1Q8N5C7 304 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 TTLL6Q8N841 843 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 OTUD7AQ8TE49 926 aaPredicted RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 HAUS7Q99871 368 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 ZC3H12CQ9C0D7 883 aaKnown RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 ZMYND15Q9H091 742 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 SMG9Q9H0W8 520 aaKnown RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 RBSNQ9H1K0 784 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 VPS33BQ9H267 617 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 C11orf16Q9NQ32 467 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 PIM2Q9P1W9 311 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 DBNLQ9UJU6 430 aaKnown RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 SERPINA10Q9UK55 444 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 DENND2AQ9ULE3 1009 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 AK9Q5TCS8 1911 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 ZNF609O15014 1411 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 DEAF1O75398 565 aaPredicted RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 GSPT1P15170 499 aaKnown RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 EIF2AK2P19525 551 aaKnown RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 NOS3P29474 1203 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 IREB2P48200 963 aaKnown RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 NRLP54845 237 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 FKBP4Q02790 459 aaKnown RBP eCLIP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 DPP8Q6V1X1 898 aaPredicted RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 FBXO33Q7Z6M2 555 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 SKAP1Q86WV1 359 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 TREML1Q86YW5 311 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 RGL4Q8IZJ4 473 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 ZGPATQ8N5A5 531 aaKnown RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 KBTBD3Q8NAB2 608 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 WFDC12Q8WWY7 111 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 FAM84BQ96KN1 310 aaPredicted RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 PRIMPOLQ96LW4 560 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 DNAJC2Q99543 621 aaKnown RBP6.02□□□□□ -1.45
VTI1B-202ENST00000553619 FSD1Q9BTV5 496 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 DIAPH3Q9NSV4 1193 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 PAG1Q9NWQ8 432 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 CASZ1Q86V15 1759 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 TAF1P21675 1872 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 SPEF2Q9C093 1822 aa6.02□□□□□ -1.45
VTI1B-202ENST00000553619 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
VTI1B-202ENST00000553619 XYLBO75191 536 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 UFL1O94874 794 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 PSAPP07602 524 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 MCCP23508 829 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 BRD2P25440 801 aaKnown RBP6.01□□□□□ -1.45
VTI1B-202ENST00000553619 CHMLP26374 656 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 ADORA1P30542 326 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 GPSM2P81274 684 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 MAP3K12Q12852 859 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 C8orf34Q49A92 452 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 C16orf46Q6P387 395 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 CMTR1Q8N1G2 835 aaKnown RBP6.01□□□□□ -1.45
VTI1B-202ENST00000553619 SPATA5Q8NB90 893 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 WDR66Q8TBY9 1149 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 TTC9Q92623 222 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 PBXIP1Q96AQ6 731 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 MEGF10Q96KG7 1140 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 PDGFDQ9GZP0 370 aaPredicted RBP6.01□□□□□ -1.45
VTI1B-202ENST00000553619 COA1Q9GZY4 146 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 HELLSQ9NRZ9 838 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 TLR7Q9NYK1 1049 aaKnown RBP6.01□□□□□ -1.45
VTI1B-202ENST00000553619 PPP1R1BQ9UD71 204 aaPredicted RBP6.01□□□□□ -1.45
VTI1B-202ENST00000553619 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.01□□□□□ -1.45
VTI1B-202ENST00000553619 RFX7Q2KHR2 1363 aa6.01□□□□□ -1.45
VTI1B-202ENST00000553619 PDS5AQ29RF7 1337 aaKnown RBP6□□□□□ -1.45
VTI1B-202ENST00000553619 ANKRD31Q8N7Z5 1873 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 A0A0G2JLW4 131 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 J3QW42 95 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 GOLIM4O00461 696 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 RNF113AO15541 343 aaKnown RBP6□□□□□ -1.45
VTI1B-202ENST00000553619 ATG7O95352 703 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 MAP4K4O95819 1239 aaPredicted RBP6□□□□□ -1.45
VTI1B-202ENST00000553619 EGFRP00533 1210 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 LDHCP07864 332 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 DPEP1P16444 411 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 CHRNA5P30532 468 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 ZAP70P43403 619 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 PHKA1P46020 1223 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 GYG1P46976 350 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 LRP8Q14114 963 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 MCMDC2Q4G0Z9 681 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 CCDC93Q567U6 631 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 DALRD3Q5D0E6 543 aaKnown RBP6□□□□□ -1.45
VTI1B-202ENST00000553619 COX20Q5RI15 118 aa6□□□□□ -1.45
VTI1B-202ENST00000553619 TSHZ3Q63HK5 1081 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms