RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 LRRC4CQ9HCJ2 640 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 BSDC1Q9NW68 430 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-220ENST00000553491 INPP5FQ9Y2H2 1132 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 NWD2Q9ULI1 1742 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 CRYBG1Q9Y4K1 1723 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 PIK3C2AO00443 1686 aa6.36□□□□□ -1.39
ATXN3-220ENST00000553491 USP6P35125 1406 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 KIAA0232Q92628 1395 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-220ENST00000553491 PF4P02776 101 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 FBLN1P23142 703 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 EIF4A3P38919 411 aaKnown RBP6.35□□□□□ -1.39
ATXN3-220ENST00000553491 TNNT2P45379 298 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-220ENST00000553491 PAK2Q13177 524 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 SEPT6Q14141 434 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 COG3Q96JB2 828 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 HEXIM2Q96MH2 286 aaKnown RBP6.35□□□□□ -1.39
ATXN3-220ENST00000553491 SNCAIPQ9Y6H5 919 aa6.35□□□□□ -1.39
ATXN3-220ENST00000553491 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 GARTP22102 1010 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 AMPHP49418 695 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 FAM160A1Q05DH4 1040 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 SLBPQ14493 270 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATXN3-220ENST00000553491 FBXL19Q6PCT2 694 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 TOM1L2Q6ZVM7 507 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 TOP6BLQ8N6T0 577 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 KCNH5Q8NCM2 988 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 ZNF296Q8WUU4 475 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-220ENST00000553491 SREK1Q8WXA9 508 aaKnown RBP6.34□□□□□ -1.39
ATXN3-220ENST00000553491 ELMO3Q96BJ8 720 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 PUS7Q96PZ0 661 aaKnown RBP6.34□□□□□ -1.39
ATXN3-220ENST00000553491 SPON2Q9BUD6 331 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 WNT10AQ9GZT5 417 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 PANK3Q9H999 370 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 FBRSQ9HAH7 460 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
ATXN3-220ENST00000553491 A0A1W2PP64 1363 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 MYOM1P52179 1685 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 CAP2P40123 477 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 GJA8P48165 433 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 OXCT1P55809 520 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 LMNB2Q03252 620 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 CAMK2GQ13555 558 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-220ENST00000553491 HDXQ7Z353 690 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 VSIG10LQ86VR7 867 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 KIAA0825Q8IV33 1275 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 PLD6Q8N2A8 252 aaKnown RBP6.33□□□□□ -1.4
ATXN3-220ENST00000553491 FAM181AQ8N9Y4 354 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 EAF1Q96JC9 268 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-220ENST00000553491 MKNK2Q9HBH9 465 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 SSU72Q9NP77 194 aaKnown RBP6.33□□□□□ -1.4
ATXN3-220ENST00000553491 ADGRE2Q9UHX3 823 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
ATXN3-220ENST00000553491 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.33□□□□□ -1.4
ATXN3-220ENST00000553491 CPSF1Q10570 1443 aaKnown RBP6.33□□□□□ -1.4
ATXN3-220ENST00000553491 BRD4O60885 1362 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-220ENST00000553491 FYB1O15117 783 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 GREM1O60565 184 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 EOMESO95936 686 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
ATXN3-220ENST00000553491 VPS72Q15906 364 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 NKG7Q16617 165 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 WIPI1Q5MNZ9 446 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-220ENST00000553491 ABI1Q8IZP0 508 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 GOLM1Q8NBJ4 401 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 BCL7CQ8WUZ0 217 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-220ENST00000553491 GPRASP2Q96D09 838 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 PAK6Q9NQU5 681 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-220ENST00000553491 PRDM10Q9NQV6 1147 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 BCL9LQ86UU0 1499 aa6.32□□□□□ -1.4
ATXN3-220ENST00000553491 EDC4Q6P2E9 1401 aaKnown RBP6.32□□□□□ -1.4
ATXN3-220ENST00000553491 COL18A1P39060 1754 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 CNTNAP4Q9C0A0 1308 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 NRAPQ86VF7 1730 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 CD163L1Q9NR16 1453 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 PRAMEF27A3QJZ7 478 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 LRIG2O94898 1065 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 ZEB1P37275 1124 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-220ENST00000553491 RRS1Q15050 365 aaKnown RBP6.31□□□□□ -1.4
ATXN3-220ENST00000553491 MCTP1Q6DN14 999 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 CBLL1Q75N03 491 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 SPRED2Q7Z698 418 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 MORC1Q86VD1 984 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 NETO1Q8TDF5 533 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 GMLQ99445 158 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 TNKS2Q9H2K2 1166 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 SUPT16HQ9Y5B9 1047 aaKnown RBP6.31□□□□□ -1.4
ATXN3-220ENST00000553491 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 NRKQ7Z2Y5 1582 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 ANKRD36BQ8N2N9 1353 aa6.31□□□□□ -1.4
ATXN3-220ENST00000553491 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms