RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 TTC14Q96N46 770 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 ZSCAN10Q96SZ4 725 aaPredicted RBP11.99□□□□□ -0.49
LINC00517-201ENST00000553396 UBAC1Q9BSL1 405 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 TAF6LQ9Y6J9 622 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 ZNF536O15090 1300 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 TNKSO95271 1327 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 ALPK3Q96L96 1907 aa11.99□□□□□ -0.49
LINC00517-201ENST00000553396 PLA2G6O60733 806 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 GOLGA8HP0CJ92 632 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 ALAS1P13196 640 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 ZNF543Q08ER8 600 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 TRDNQ13061 729 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 PRAMEF19Q5SWL8 479 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 OLFML2BQ68BL8 750 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 KIAA1211Q6ZU35 1233 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 CYB5R4Q7L1T6 521 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 UBE2Q1Q7Z7E8 422 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 DGKHQ86XP1 1220 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 ANKRD35Q8N283 1001 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 ENAHQ8N8S7 591 aaPredicted RBP11.98□□□□□ -0.49
LINC00517-201ENST00000553396 PNMA1Q8ND90 353 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 TRPV1Q8NER1 839 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 DDX11Q96FC9 970 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 ESYT1Q9BSJ8 1104 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 KAT14Q9H8E8 782 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 RNF146Q9NTX7 359 aa11.98□□□□□ -0.49
LINC00517-201ENST00000553396 RBM8AQ9Y5S9 174 aaKnown RBP11.98□□□□□ -0.49
LINC00517-201ENST00000553396 E7EWF7 191 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 IGHA2P01877 340 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 FDX1P10109 184 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 CYBAP13498 195 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 NT5C2P49902 561 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 ZNF792Q3KQV3 632 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 CCDC178Q5BJE1 867 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 STOX1Q6ZVD7 989 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 RALYLQ86SE5 291 aaKnown RBP11.97□□□□□ -0.49
LINC00517-201ENST00000553396 CHST13Q8NET6 341 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 MAP4K1Q92918 833 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 PAWRQ96IZ0 340 aaKnown RBP11.97□□□□□ -0.49
LINC00517-201ENST00000553396 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 LSG1Q9H089 658 aaKnown RBP11.97□□□□□ -0.49
LINC00517-201ENST00000553396 CPVLQ9H3G5 476 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 ACAD9Q9H845 621 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 ANO2Q9NQ90 1003 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 FBXO40Q9UH90 709 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 CCPG1Q9ULG6 757 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 LCTP09848 1927 aa11.97□□□□□ -0.49
LINC00517-201ENST00000553396 SNHG28P0DPA3 235 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 IFIT1BQ5T764 474 aaKnown RBP11.96□□□□□ -0.49
LINC00517-201ENST00000553396 PRPF38BQ5VTL8 546 aaKnown RBP11.96□□□□□ -0.49
LINC00517-201ENST00000553396 LHX8Q68G74 356 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 BTNL9Q6UXG8 535 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 CHST3Q7LGC8 479 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 ANKLE1Q8NAG6 615 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 NCOA7Q8NI08 942 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 DPF3Q92784 378 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 TINF2Q9BSI4 451 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 RANBP17Q9H2T7 1088 aaKnown RBP11.96□□□□□ -0.49
LINC00517-201ENST00000553396 DDX20Q9UHI6 824 aaKnown RBP11.96□□□□□ -0.49
LINC00517-201ENST00000553396 OGDHLQ9ULD0 1010 aa11.96□□□□□ -0.49
LINC00517-201ENST00000553396 BAZ2BQ9UIF8 2168 aaKnown RBP11.95□□□□□ -0.5
LINC00517-201ENST00000553396 DNAJC25-GNG10A0A024R161 153 aa11.95□□□□□ -0.5
LINC00517-201ENST00000553396 CDC45O75419 566 aa11.95□□□□□ -0.5
LINC00517-201ENST00000553396 ICAM1P05362 532 aa11.95□□□□□ -0.5
LINC00517-201ENST00000553396 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
LINC00517-201ENST00000553396 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
LINC00517-201ENST00000553396 MUM1L1Q5H9M0 696 aa11.95□□□□□ -0.5
LINC00517-201ENST00000553396 NECAB2Q7Z6G3 386 aa11.95□□□□□ -0.5
LINC00517-201ENST00000553396 ANKS1AQ92625 1134 aa11.95□□□□□ -0.5
LINC00517-201ENST00000553396 HTATIP2Q9BUP3 242 aa11.95□□□□□ -0.5
LINC00517-201ENST00000553396 UBA5Q9GZZ9 404 aa11.95□□□□□ -0.5
LINC00517-201ENST00000553396 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
LINC00517-201ENST00000553396 DIS3Q9Y2L1 958 aaKnown RBP11.95□□□□□ -0.5
LINC00517-201ENST00000553396 IFIT3O14879 490 aaKnown RBP11.94□□□□□ -0.5
LINC00517-201ENST00000553396 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
LINC00517-201ENST00000553396 PARP1P09874 1014 aaKnown RBP11.94□□□□□ -0.5
LINC00517-201ENST00000553396 CAPN2P17655 700 aa11.94□□□□□ -0.5
LINC00517-201ENST00000553396 SEC23AQ15436 765 aa11.94□□□□□ -0.5
LINC00517-201ENST00000553396 TKFCQ3LXA3 575 aa11.94□□□□□ -0.5
LINC00517-201ENST00000553396 GPATCH4Q5T3I0 446 aaKnown RBP11.94□□□□□ -0.5
LINC00517-201ENST00000553396 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
LINC00517-201ENST00000553396 NSMFQ6X4W1 530 aa11.94□□□□□ -0.5
LINC00517-201ENST00000553396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00517-201ENST00000553396 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
LINC00517-201ENST00000553396 ERICH2A1L162 156 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 NFIBO00712 420 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 SLC27A2O14975 620 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 SEPT4O43236 478 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 MSCO60682 206 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 ANTXR2P58335 489 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 CDC37Q16543 378 aaPredicted RBP11.93□□□□□ -0.5
LINC00517-201ENST00000553396 USH1GQ495M9 461 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 ASPRV1Q53RT3 343 aa11.93□□□□□ -0.5
LINC00517-201ENST00000553396 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
LINC00517-201ENST00000553396 LENG1Q96BZ8 264 aaPredicted RBP11.93□□□□□ -0.5
LINC00517-201ENST00000553396 FGD4Q96M96 766 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms