RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ANO2Q9NQ90 1003 aa17.96■□□□□ 0.47
SHMT2-204ENST00000553324 OGDHLQ9ULD0 1010 aa17.96■□□□□ 0.47
SHMT2-204ENST00000553324 ZNF536O15090 1300 aa17.96■□□□□ 0.46
SHMT2-204ENST00000553324 FRMPD2Q68DX3 1309 aaPredicted RBP17.96■□□□□ 0.46
SHMT2-204ENST00000553324 RBBP6Q7Z6E9 1792 aaKnown RBP17.95■□□□□ 0.46
SHMT2-204ENST00000553324 FARP2O94887 1054 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-204ENST00000553324 ICAM1P05362 532 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 PGK2P07205 417 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 CNGA1P29973 690 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 CCND3P30281 292 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-204ENST00000553324 SLC16A2P36021 539 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 ASPRV1Q53RT3 343 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 RNF20Q5VTR2 975 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 CCDC174Q6PII3 467 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 ZNF467Q7Z7K2 595 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-204ENST00000553324 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 AGBL1Q96MI9 1066 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 TINF2Q9BSI4 451 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 MTA3Q9BTC8 594 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 HTATIP2Q9BUP3 242 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
SHMT2-204ENST00000553324 DNAJC25-GNG10A0A024R161 153 aa17.94■□□□□ 0.46
SHMT2-204ENST00000553324 IFIT3O14879 490 aaKnown RBP17.94■□□□□ 0.46
SHMT2-204ENST00000553324 ALAS1P13196 640 aa17.94■□□□□ 0.46
SHMT2-204ENST00000553324 SEC23AQ15436 765 aa17.94■□□□□ 0.46
SHMT2-204ENST00000553324 CYB5R4Q7L1T6 521 aa17.94■□□□□ 0.46
SHMT2-204ENST00000553324 NECAB2Q7Z6G3 386 aa17.94■□□□□ 0.46
SHMT2-204ENST00000553324 UBE2Q1Q7Z7E8 422 aa17.94■□□□□ 0.46
SHMT2-204ENST00000553324 RNF146Q9NTX7 359 aa17.94■□□□□ 0.46
SHMT2-204ENST00000553324 DDX20Q9UHI6 824 aaKnown RBP17.94■□□□□ 0.46
SHMT2-204ENST00000553324 CCPG1Q9ULG6 757 aa17.94■□□□□ 0.46
SHMT2-204ENST00000553324 PARP1P09874 1014 aaKnown RBP17.93■□□□□ 0.46
SHMT2-204ENST00000553324 CYBAP13498 195 aa17.93■□□□□ 0.46
SHMT2-204ENST00000553324 NECTIN1Q15223 517 aa17.93■□□□□ 0.46
SHMT2-204ENST00000553324 LHX8Q68G74 356 aa17.93■□□□□ 0.46
SHMT2-204ENST00000553324 RASGRP2Q7LDG7 609 aa17.93■□□□□ 0.46
SHMT2-204ENST00000553324 TMTC2Q8N394 836 aa17.93■□□□□ 0.46
SHMT2-204ENST00000553324 HOMER2Q9NSB8 354 aa17.93■□□□□ 0.46
SHMT2-204ENST00000553324 PFASO15067 1338 aa17.93■□□□□ 0.46
SHMT2-204ENST00000553324 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
SHMT2-204ENST00000553324 SEPT4O43236 478 aa17.92■□□□□ 0.46
SHMT2-204ENST00000553324 WTAPQ15007 396 aa17.92■□□□□ 0.46
SHMT2-204ENST00000553324 CREB3L3Q68CJ9 461 aa17.92■□□□□ 0.46
SHMT2-204ENST00000553324 MAMDC4Q6UXC1 1216 aa17.92■□□□□ 0.46
SHMT2-204ENST00000553324 CNPY2Q9Y2B0 182 aa17.92■□□□□ 0.46
SHMT2-204ENST00000553324 PARP14Q460N5 1801 aa17.92■□□□□ 0.46
SHMT2-204ENST00000553324 SYNGAP1Q96PV0 1343 aa17.92■□□□□ 0.46
SHMT2-204ENST00000553324 ZNF236Q9UL36 1845 aa17.91■□□□□ 0.46
SHMT2-204ENST00000553324 SLC27A2O14975 620 aa17.91■□□□□ 0.46
SHMT2-204ENST00000553324 GOLGA8HP0CJ92 632 aa17.91■□□□□ 0.46
SHMT2-204ENST00000553324 MCM5P33992 734 aa17.91■□□□□ 0.46
SHMT2-204ENST00000553324 SNAP25P60880 206 aa17.91■□□□□ 0.46
SHMT2-204ENST00000553324 PRPF38BQ5VTL8 546 aaKnown RBP17.91■□□□□ 0.46
SHMT2-204ENST00000553324 PAWRQ96IZ0 340 aaKnown RBP17.91■□□□□ 0.46
SHMT2-204ENST00000553324 MAF1Q9H063 256 aa17.91■□□□□ 0.46
SHMT2-204ENST00000553324 WDR19Q8NEZ3 1342 aa17.91■□□□□ 0.46
SHMT2-204ENST00000553324 TNRC18O15417 2968 aaPredicted RBP17.91■□□□□ 0.46
SHMT2-204ENST00000553324 TMEM67Q5HYA8 995 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 STOX1Q6ZVD7 989 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 CATIPQ7Z7H3 387 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 MB21D2Q8IYB1 491 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-204ENST00000553324 ARRDC4Q8NCT1 418 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 TRPV1Q8NER1 839 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 IGDCC4Q8TDY8 1250 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 DPF3Q92784 378 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 TMEM87BQ96K49 555 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 UBA5Q9GZZ9 404 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 A1CFQ9NQ94 594 aaKnown RBP17.9■□□□□ 0.46
SHMT2-204ENST00000553324 LAMA4Q16363 1823 aa17.9■□□□□ 0.46
SHMT2-204ENST00000553324 ASB14A6NK59 587 aa17.89■□□□□ 0.45
SHMT2-204ENST00000553324 PRAMEF19Q5SWL8 479 aa17.89■□□□□ 0.45
SHMT2-204ENST00000553324 ADGRF4Q8IZF3 695 aa17.89■□□□□ 0.45
SHMT2-204ENST00000553324 FAM133AQ8N9E0 248 aa17.89■□□□□ 0.45
SHMT2-204ENST00000553324 CYP39A1Q9NYL5 469 aa17.89■□□□□ 0.45
SHMT2-204ENST00000553324 TAF6LQ9Y6J9 622 aa17.89■□□□□ 0.45
SHMT2-204ENST00000553324 KLRF2D3W0D1 207 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 DHX16O60231 1041 aaKnown RBP17.88■□□□□ 0.45
SHMT2-204ENST00000553324 TRAF1Q13077 416 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 KRT32Q14532 448 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 TSGA10IPQ3SY00 556 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 MUM1L1Q5H9M0 696 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 CHST3Q7LGC8 479 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 RGS22Q8NE09 1264 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 ABHD16BQ9H3Z7 469 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 C11orf49Q9H6J7 331 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 ADD3Q9UEY8 706 aaKnown RBP17.88■□□□□ 0.45
SHMT2-204ENST00000553324 NR2E3Q9Y5X4 410 aa17.88■□□□□ 0.45
SHMT2-204ENST00000553324 COL11A1P12107 1806 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-204ENST00000553324 LOC102724159A0A0B4J2E5 919 aa17.87■□□□□ 0.45
SHMT2-204ENST00000553324 PALM3A6NDB9 673 aaPredicted RBP17.87■□□□□ 0.45
SHMT2-204ENST00000553324 PRC1O43663 620 aa17.87■□□□□ 0.45
SHMT2-204ENST00000553324 REC8O95072 547 aa17.87■□□□□ 0.45
SHMT2-204ENST00000553324 RARBP10826 455 aa17.87■□□□□ 0.45
SHMT2-204ENST00000553324 AKR1A1P14550 325 aa17.87■□□□□ 0.45
SHMT2-204ENST00000553324 PWP2Q15269 919 aaKnown RBP17.87■□□□□ 0.45
SHMT2-204ENST00000553324 NSMFQ6X4W1 530 aa17.87■□□□□ 0.45
SHMT2-204ENST00000553324 MAD2L2Q9UI95 211 aa17.87■□□□□ 0.45
SHMT2-204ENST00000553324 FAM184BQ9ULE4 1060 aa17.87■□□□□ 0.45
SHMT2-204ENST00000553324 DNM1LO00429 736 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms