RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 NUP88Q99567 741 aaPredicted RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 COL2A1P02458 1487 aaPredicted RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 PNMA6FA0A0J9YX94 578 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 CCNT1O60563 726 aaKnown RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 MAPK8IP2Q13387 824 aaPredicted RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 TNFAIP1Q13829 316 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 USP49Q70CQ1 688 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 MICALL2Q8IY33 904 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 FAM177A1Q8N128 213 aaPredicted RBP9.41□□□□□ -0.9
RAB5B-210ENST00000553116 EPSTI1Q96J88 318 aa9.41□□□□□ -0.9
RAB5B-210ENST00000553116 ZBTB5O15062 677 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 GMPSP49915 693 aaPredicted RBP9.4□□□□□ -0.9
RAB5B-210ENST00000553116 ZYXQ15942 572 aaKnown RBP9.4□□□□□ -0.9
RAB5B-210ENST00000553116 TBC1D10BQ4KMP7 808 aaPredicted RBP9.4□□□□□ -0.9
RAB5B-210ENST00000553116 CDAN1Q8IWY9 1227 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 CNTNAP1P78357 1384 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 TMEM232C9JQI7 657 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 NDUFB10O96000 172 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 RPS12P25398 132 aaKnown RBP9.4□□□□□ -0.9
RAB5B-210ENST00000553116 PTGER2P43116 358 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 CDC37Q16543 378 aaPredicted RBP9.4□□□□□ -0.9
RAB5B-210ENST00000553116 ARHGAP27Q6ZUM4 889 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 FAM83AQ86UY5 434 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 MTMR14Q8NCE2 650 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 CUL5Q93034 780 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 MKL1Q969V6 931 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 SGIP1Q9BQI5 828 aa9.4□□□□□ -0.9
RAB5B-210ENST00000553116 ZHX1Q9UKY1 873 aaPredicted RBP9.4□□□□□ -0.9
RAB5B-210ENST00000553116 DPCR1Q3MIW9 517 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 FKBP1CQ5VVH2 108 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 DTHD1Q6ZMT9 781 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 NEK8Q86SG6 692 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 DRC7Q8IY82 874 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 PDLIM2Q96JY6 352 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 FEZ1Q99689 392 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 TRIM5Q9C035 493 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 TMEM260Q9NX78 707 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 FAM237AA0A1B0GTK4 181 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 BMP3P12645 472 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 AFMP43652 599 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 RASA3Q14644 834 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 RRP1BQ14684 758 aaKnown RBP9.39□□□□□ -0.91
RAB5B-210ENST00000553116 POSTNQ15063 836 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 UBE2SQ16763 222 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 AOPEPQ8N6M6 819 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 TBCKQ8TEA7 893 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 SPON1Q9HCB6 807 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 CNOT7Q9UIV1 285 aaKnown RBP9.39□□□□□ -0.91
RAB5B-210ENST00000553116 ARFGEF1Q9Y6D6 1849 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 ESYT2A0FGR8 921 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 M0R2N6 131 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 MSNP26038 577 aaKnown RBP9.39□□□□□ -0.91
RAB5B-210ENST00000553116 ECE1P42892 770 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 MRPL12P52815 198 aaKnown RBP9.39□□□□□ -0.91
RAB5B-210ENST00000553116 NLRP12P59046 1061 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 SNAP25P60880 206 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 QRICH1Q2TAL8 776 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 USH1GQ495M9 461 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 KANK3Q6NY19 840 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 PPP1R18Q6NYC8 613 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
RAB5B-210ENST00000553116 GRAMD1CQ8IYS0 662 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.39□□□□□ -0.91
RAB5B-210ENST00000553116 CCDC39Q9UFE4 941 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 PCDHA1Q9Y5I3 950 aa9.39□□□□□ -0.91
RAB5B-210ENST00000553116 FOXN1O15353 648 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 MARCH6O60337 910 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 NEMFO60524 1076 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 EGFRP00533 1210 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 TPM4P67936 248 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 JAG1P78504 1218 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 ARL6IP4Q66PJ3 421 aaKnown RBP9.38□□□□□ -0.91
RAB5B-210ENST00000553116 SPC24Q8NBT2 197 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 GMCL1P1Q8NEA9 526 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 PSTPIP2Q9H939 334 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 LTBP3Q9NS15 1303 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 KIF4BQ2VIQ3 1234 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 SYDE2Q5VT97 1194 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 SIAH1Q8IUQ4 282 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 ACER1Q8TDN7 264 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 PCDHA5Q9Y5H7 936 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 A0A1W2PRG0 241 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 H7C1D1 291 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 CDC25AP30304 524 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 UBA7P41226 1012 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 GMCL1Q96IK5 515 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 TMEM60Q9H2L4 133 aa9.38□□□□□ -0.91
RAB5B-210ENST00000553116 PPP1R11O60927 126 aaPredicted RBP9.37□□□□□ -0.91
RAB5B-210ENST00000553116 SMC2O95347 1197 aa9.37□□□□□ -0.91
RAB5B-210ENST00000553116 OR52Z1P0C646 297 aa9.37□□□□□ -0.91
RAB5B-210ENST00000553116 LONP1P36776 959 aaKnown RBP9.37□□□□□ -0.91
RAB5B-210ENST00000553116 STAT2P52630 851 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms