RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 MKNK2Q9HBH9 465 aa20.24■□□□□ 0.83
CACNB3-222ENST00000552465 CTDP1Q9Y5B0 961 aaPredicted RBP20.24■□□□□ 0.83
CACNB3-222ENST00000552465 CDH23Q9H251 3354 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 CD4P01730 458 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 ADGRE1Q14246 886 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 STK11IPQ8N1F8 1099 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 CHST13Q8NET6 341 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 HERVK_113Q902F9 699 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 STRBPQ96SI9 672 aaKnown RBP20.23■□□□□ 0.83
CACNB3-222ENST00000552465 SLC38A10Q9HBR0 1119 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 IL23AQ9NPF7 189 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 THEGQ9P2T0 379 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 CLIP2Q9UDT6 1046 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 FBXO40Q9UH90 709 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 MSRAQ9UJ68 235 aa20.23■□□□□ 0.83
CACNB3-222ENST00000552465 CYP2C18P33260 490 aa20.22■□□□□ 0.83
CACNB3-222ENST00000552465 RAB30Q15771 203 aa20.22■□□□□ 0.83
CACNB3-222ENST00000552465 CCDC144CPQ8IYA2 1237 aa20.22■□□□□ 0.83
CACNB3-222ENST00000552465 KATNBL1Q9H079 304 aa20.22■□□□□ 0.83
CACNB3-222ENST00000552465 IGKV6D-41A0A0C4DH26 115 aa20.21■□□□□ 0.83
CACNB3-222ENST00000552465 GSG1L2A8MUP6 293 aa20.21■□□□□ 0.83
CACNB3-222ENST00000552465 OAZ1P54368 228 aa20.21■□□□□ 0.83
CACNB3-222ENST00000552465 MRPS5P82675 430 aaKnown RBP20.21■□□□□ 0.83
CACNB3-222ENST00000552465 CCDC85BQ15834 202 aaPredicted RBP20.21■□□□□ 0.83
CACNB3-222ENST00000552465 GIMAP6Q6P9H5 292 aa20.21■□□□□ 0.83
CACNB3-222ENST00000552465 SLC43A3Q8NBI5 491 aa20.21■□□□□ 0.83
CACNB3-222ENST00000552465 MKL1Q969V6 931 aa20.21■□□□□ 0.83
CACNB3-222ENST00000552465 ZBTB40Q9NUA8 1239 aa20.21■□□□□ 0.83
CACNB3-222ENST00000552465 CXXC1Q9P0U4 656 aaPredicted RBP20.21■□□□□ 0.83
CACNB3-222ENST00000552465 FEM1BQ9UK73 627 aa20.21■□□□□ 0.83
CACNB3-222ENST00000552465 MINDY4BA8MYZ0 360 aa20.2■□□□□ 0.82
CACNB3-222ENST00000552465 FGBP02675 491 aa20.2■□□□□ 0.82
CACNB3-222ENST00000552465 MS4A1P11836 297 aa20.2■□□□□ 0.82
CACNB3-222ENST00000552465 IGFBP4P22692 258 aa20.2■□□□□ 0.82
CACNB3-222ENST00000552465 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACNB3-222ENST00000552465 BEX3Q00994 111 aa20.2■□□□□ 0.82
CACNB3-222ENST00000552465 ADAMTS19Q8TE59 1207 aa20.2■□□□□ 0.82
CACNB3-222ENST00000552465 NKX2-4Q9H2Z4 354 aa20.2■□□□□ 0.82
CACNB3-222ENST00000552465 CNTN2Q02246 1040 aa20.19■□□□□ 0.82
CACNB3-222ENST00000552465 TNFAIP2Q03169 654 aa20.19■□□□□ 0.82
CACNB3-222ENST00000552465 CXCL17Q6UXB2 119 aa20.19■□□□□ 0.82
CACNB3-222ENST00000552465 MTIF3Q9H2K0 278 aaKnown RBP20.19■□□□□ 0.82
CACNB3-222ENST00000552465 SYNPO2Q9UMS6 1093 aa20.19■□□□□ 0.82
CACNB3-222ENST00000552465 GREB1LQ9C091 1923 aaPredicted RBP20.18■□□□□ 0.82
CACNB3-222ENST00000552465 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.18■□□□□ 0.82
CACNB3-222ENST00000552465 CABYRO75952 493 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 NOL8Q76FK4 1167 aaKnown RBP20.18■□□□□ 0.82
CACNB3-222ENST00000552465 ZNF444Q8N0Y2 327 aaPredicted RBP20.18■□□□□ 0.82
CACNB3-222ENST00000552465 FAM133AQ8N9E0 248 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 GMCL1P1Q8NEA9 526 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 CEP95Q96GE4 821 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 HIPK3Q9H422 1215 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 SLC28A3Q9HAS3 691 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 MTMR4Q9NYA4 1195 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 DDX19BQ9UMR2 479 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 YBX2Q9Y2T7 364 aaKnown RBP20.18■□□□□ 0.82
CACNB3-222ENST00000552465 ASTN1O14525 1302 aa20.18■□□□□ 0.82
CACNB3-222ENST00000552465 ITGA7Q13683 1181 aa20.17■□□□□ 0.82
CACNB3-222ENST00000552465 UHRF1Q96T88 793 aaPredicted RBP20.17■□□□□ 0.82
CACNB3-222ENST00000552465 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
CACNB3-222ENST00000552465 RAPGEFL1Q9UHV5 662 aa20.17■□□□□ 0.82
CACNB3-222ENST00000552465 GNEQ9Y223 722 aaKnown RBP20.17■□□□□ 0.82
CACNB3-222ENST00000552465 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
CACNB3-222ENST00000552465 UMODL1Q5DID0 1318 aa20.17■□□□□ 0.82
CACNB3-222ENST00000552465 SOWAHBA6NEL2 793 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 PRDM1O75626 825 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 TTLL1O95922 423 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 FDX1P10109 184 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 SLFN13Q68D06 897 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 OTOP2Q7RTS6 562 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 LRRC47Q8N1G4 583 aaKnown RBP20.16■□□□□ 0.82
CACNB3-222ENST00000552465 OSBP2Q969R2 916 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 ACAD9Q9H845 621 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 ZNF287Q9HBT7 754 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 GRIN2DO15399 1336 aa20.16■□□□□ 0.82
CACNB3-222ENST00000552465 ASB14A6NK59 587 aa20.15■□□□□ 0.82
CACNB3-222ENST00000552465 BMP3P12645 472 aa20.15■□□□□ 0.82
CACNB3-222ENST00000552465 CCL23P55773 120 aa20.15■□□□□ 0.82
CACNB3-222ENST00000552465 FSCN1Q16658 493 aaKnown RBP20.15■□□□□ 0.82
CACNB3-222ENST00000552465 TLK2Q86UE8 772 aa20.15■□□□□ 0.82
CACNB3-222ENST00000552465 NOC4LQ9BVI4 516 aaKnown RBP20.15■□□□□ 0.82
CACNB3-222ENST00000552465 SEZ6LQ9BYH1 1024 aa20.15■□□□□ 0.82
CACNB3-222ENST00000552465 LRRCC1Q9C099 1032 aa20.15■□□□□ 0.82
CACNB3-222ENST00000552465 AP5M1Q9H0R1 490 aa20.15■□□□□ 0.82
CACNB3-222ENST00000552465 EPB41L4AQ9HCS5 686 aaPredicted RBP20.15■□□□□ 0.82
CACNB3-222ENST00000552465 A1CFQ9NQ94 594 aaKnown RBP20.15■□□□□ 0.82
CACNB3-222ENST00000552465 TMEM232C9JQI7 657 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 DYNC1LI2O43237 492 aaPredicted RBP20.14■□□□□ 0.81
CACNB3-222ENST00000552465 SMPD1P17405 629 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 RABGGTBP53611 331 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 KBTBD3Q8NAB2 608 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 IL27Q8NEV9 243 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 APPBP2Q92624 585 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 AGBL1Q96MI9 1066 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 TRPV6Q9H1D0 765 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 RNF146Q9NTX7 359 aa20.14■□□□□ 0.81
CACNB3-222ENST00000552465 ZNF536O15090 1300 aa20.13■□□□□ 0.81
CACNB3-222ENST00000552465 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
CACNB3-222ENST00000552465 SMARCA5O60264 1052 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms