RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 LRP10Q7Z4F1 713 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 DTWD2Q8NBA8 298 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 SYTL4Q96C24 671 aaPredicted RBP6.18□□□□□ -1.42
HCFC2-206ENST00000552343 TMEM87BQ96K49 555 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 LNPKQ9C0E8 428 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 TMPRSS5Q9H3S3 457 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 ZSWIM4Q9H7M6 989 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 CEP131Q9UPN4 1083 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
HCFC2-206ENST00000552343 POLR3KQ9Y2Y1 108 aaPredicted RBP6.18□□□□□ -1.42
HCFC2-206ENST00000552343 IRAK3Q9Y616 596 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 OR14I1A6ND48 311 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 SMAD7O15105 426 aaKnown RBP6.17□□□□□ -1.42
HCFC2-206ENST00000552343 GUCY2CP25092 1073 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 ETFBP38117 255 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 CASP7P55210 303 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 RAB33AQ14088 237 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 BBS9Q3SYG4 887 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 INTS3Q68E01 1043 aaKnown RBP6.17□□□□□ -1.42
HCFC2-206ENST00000552343 LSRQ86X29 649 aaPredicted RBP6.17□□□□□ -1.42
HCFC2-206ENST00000552343 ZDHHC14Q8IZN3 488 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 BORCS6Q96GS4 357 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 DHRS1Q96LJ7 313 aa6.17□□□□□ -1.42
HCFC2-206ENST00000552343 SLC22A31A6NKX4 558 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 CLSTN1O94985 981 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 NAT2P11245 290 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 EPHB3P54753 998 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 VMACQ2NL98 169 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 ERICH6BQ5W0A0 696 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 NLRC3Q7RTR2 1065 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 SIRT2Q8IXJ6 389 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 FAM13CQ8NE31 585 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 PPP1R13LQ8WUF5 828 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 PHAXQ9H814 394 aaKnown RBP6.16□□□□□ -1.42
HCFC2-206ENST00000552343 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 KCNH3Q9ULD8 1083 aa6.16□□□□□ -1.42
HCFC2-206ENST00000552343 SRSF3P84103 164 aaKnown RBP6.15□□□□□ -1.42
HCFC2-206ENST00000552343 TEKQ02763 1124 aa6.15□□□□□ -1.42
HCFC2-206ENST00000552343 KRTAP1-1Q07627 177 aa6.15□□□□□ -1.42
HCFC2-206ENST00000552343 IFRD2Q12894 506 aaPredicted RBP6.15□□□□□ -1.42
HCFC2-206ENST00000552343 NCAPHQ15003 741 aa6.15□□□□□ -1.42
HCFC2-206ENST00000552343 CCDC144BQ3MJ40 725 aa6.15□□□□□ -1.42
HCFC2-206ENST00000552343 ADGRF1Q5T601 910 aa6.15□□□□□ -1.42
HCFC2-206ENST00000552343 CDCP2Q5VXM1 449 aa6.15□□□□□ -1.42
HCFC2-206ENST00000552343 MCATQ8IVS2 390 aaKnown RBP6.15□□□□□ -1.42
HCFC2-206ENST00000552343 SLFN12Q8IYM2 578 aa6.15□□□□□ -1.42
HCFC2-206ENST00000552343 PHACTR4Q8IZ21 702 aa6.15□□□□□ -1.42
HCFC2-206ENST00000552343 SRPK1Q96SB4 655 aaKnown RBP6.15□□□□□ -1.42
HCFC2-206ENST00000552343 EPB41L4AQ9HCS5 686 aaPredicted RBP6.15□□□□□ -1.42
HCFC2-206ENST00000552343 NOTOA8MTQ0 251 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 LRRN2O75325 713 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 EFEMP2O95967 443 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 NME1P15531 152 aaKnown RBP6.14□□□□□ -1.43
HCFC2-206ENST00000552343 GBP1P32455 592 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 DUSP4Q13115 394 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 LARP1BQ659C4 914 aaKnown RBP6.14□□□□□ -1.43
HCFC2-206ENST00000552343 OVOS1Q6IE37 1185 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 SYT8Q8NBV8 401 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 HNRNPLLQ8WVV9 542 aaKnown RBP6.14□□□□□ -1.43
HCFC2-206ENST00000552343 LINC01599Q8WXQ3 324 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 CCDC74BQ96LY2 380 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 CNNM2Q9H8M5 875 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 CORINQ9Y5Q5 1042 aa6.14□□□□□ -1.43
HCFC2-206ENST00000552343 TNFRSF10CO14798 259 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 KLF4O43474 513 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
HCFC2-206ENST00000552343 BMS1Q14692 1282 aaKnown RBP6.13□□□□□ -1.43
HCFC2-206ENST00000552343 ZXDCQ2QGD7 858 aaPredicted RBP6.13□□□□□ -1.43
HCFC2-206ENST00000552343 ARSHQ5FYA8 562 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 NLRX1Q86UT6 975 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 SMARCC1Q92922 1105 aaPredicted RBP6.13□□□□□ -1.43
HCFC2-206ENST00000552343 ACSF2Q96CM8 615 aaPredicted RBP6.13□□□□□ -1.43
HCFC2-206ENST00000552343 ATG4CQ96DT6 458 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 TEPSINQ96N21 525 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 G6PC3Q9BUM1 346 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.13□□□□□ -1.43
HCFC2-206ENST00000552343 ADAM7Q9H2U9 754 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 CNTD2Q9H8S5 307 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 SIRT5Q9NXA8 310 aa6.13□□□□□ -1.43
HCFC2-206ENST00000552343 CDK11AQ9UQ88 783 aaPredicted RBP6.13□□□□□ -1.43
HCFC2-206ENST00000552343 HRKO00198 91 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 N4BP3O15049 544 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 DDAH1O94760 285 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 RNF4P78317 190 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 DDR2Q16832 855 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 TAF7LQ5H9L4 462 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 SP8Q8IXZ3 490 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 CYB5D2Q8WUJ1 264 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 CCDC113Q9H0I3 377 aa6.12□□□□□ -1.43
HCFC2-206ENST00000552343 AGRPO00253 132 aa6.11□□□□□ -1.43
HCFC2-206ENST00000552343 IRS4O14654 1257 aaPredicted RBP6.11□□□□□ -1.43
HCFC2-206ENST00000552343 RGS13O14921 159 aa6.11□□□□□ -1.43
HCFC2-206ENST00000552343 VIPR1P32241 457 aa6.11□□□□□ -1.43
HCFC2-206ENST00000552343 EFEMP1Q12805 493 aa6.11□□□□□ -1.43
HCFC2-206ENST00000552343 SERINC3Q13530 473 aa6.11□□□□□ -1.43
HCFC2-206ENST00000552343 SPATS1Q496A3 300 aa6.11□□□□□ -1.43
HCFC2-206ENST00000552343 EEPD1Q7L9B9 569 aa6.11□□□□□ -1.43
HCFC2-206ENST00000552343 DEPDC7Q96QD5 511 aa6.11□□□□□ -1.43
HCFC2-206ENST00000552343 EPN3Q9H201 632 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms