RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 MRPL18Q9H0U6 180 aaKnown RBP5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 RBAK-RBAKDNI3L0D1 243 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 AKAP10O43572 662 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 ZEB2O60315 1214 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 KPNA6O60684 536 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 PEX14O75381 377 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 CRTAMO95727 393 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 CPP00450 1065 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 AMPD1P23109 780 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 GNALP38405 381 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 TESK1Q15569 626 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 PRSS53Q2L4Q9 553 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 CFAP100Q494V2 611 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 NOL9Q5SY16 702 aaKnown RBP5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 ABHD17CQ6PCB6 329 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 SEZ6L2Q6UXD5 910 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 Q6ZS46 218 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 SPATS2Q86XZ4 545 aaKnown RBP5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 KIF18BQ86Y91 864 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 FIBCD1Q8N539 461 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 MIPEPQ99797 713 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 CCDC8Q9H0W5 538 aaPredicted RBP5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 NOL6Q9H6R4 1146 aaKnown RBP5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 SSU72Q9NP77 194 aaKnown RBP5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 FBXL21Q9UKT6 434 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 TRAF6Q9Y4K3 522 aa5.46□□□□□ -1.54
LSM6P2-201ENST00000552208 B4E1Z4 1266 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 F8W735 103 aaPredicted RBP5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 ARNTLO00327 626 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 NEMP1O14524 444 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 LRRN2O75325 713 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 SCGB1D2O95969 90 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 ETV3P41162 512 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 PPP2R5DQ14738 602 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 ZCCHC8Q6NZY4 707 aaKnown RBP5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 FDX2Q6P4F2 183 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 CCAR1Q8IX12 1150 aaKnown RBP5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 DCAF4Q8WV16 495 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 EZH1Q92800 747 aaPredicted RBP5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 PMM1Q92871 262 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 COPS5Q92905 334 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 CAMKK2Q96RR4 588 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 TTC1Q99614 292 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 MCMBPQ9BTE3 642 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 CDH19Q9H159 772 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 SEMA6CQ9H3T2 930 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 GPR55Q9Y2T6 319 aaPredicted RBP5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 NPFFR2Q9Y5X5 522 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 CNTNAP4Q9C0A0 1308 aa5.45□□□□□ -1.54
LSM6P2-201ENST00000552208 AQP7O14520 342 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 GABRDO14764 452 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 ADAM23O75077 832 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 VAMP4O75379 141 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 EOMESO95936 686 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 SNRPB2P08579 225 aaKnown RBP5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 ELNP15502 786 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 FLT3P36888 993 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 ID4P47928 161 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 PREPP48147 710 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 ITKQ08881 620 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 MAP9Q49MG5 647 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 CCSAPQ6IQ19 270 aaPredicted RBP5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 CDPF1Q6NVV7 123 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 KCNT2Q6UVM3 1135 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 UBE2R2Q712K3 238 aaPredicted RBP5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 AGGF1Q8N302 714 aaeCLIP5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 PI4K2BQ8TCG2 481 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 WHAMMQ8TF30 809 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 SLC39A13Q96H72 371 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 CCDC136Q96JN2 1154 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 PLVAPQ9BX97 442 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 RTFDC1Q9BY42 306 aaPredicted RBP5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 IFT22Q9H7X7 185 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 CRTAC1Q9NQ79 661 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 PRDM10Q9NQV6 1147 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 GFOD1Q9NXC2 390 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 ZIM2Q9NZV7 527 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 PCDHA9Q9Y5H5 950 aa5.44□□□□□ -1.54
LSM6P2-201ENST00000552208 K7ESF4 209 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 ARVCFO00192 962 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 CBX4O00257 560 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 DYNC1LI2O43237 492 aaPredicted RBP5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 SIGLEC6O43699 453 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 F2P00734 622 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 ITIH2P19823 946 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 ECI1P42126 302 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 KCNJ6P48051 423 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 AMPD2Q01433 879 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 DSG1Q02413 1049 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 PIN1Q13526 163 aaPredicted RBP5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 SKOR2Q2VWA4 1001 aaPredicted RBP5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 ACBD5Q5T8D3 534 aaPredicted RBP5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 PIK3R6Q5UE93 754 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 SYDE2Q5VT97 1194 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 RSPO2Q6UXX9 243 aaPredicted RBP5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 FAM214BQ7L5A3 538 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 TMC3Q7Z5M5 1100 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 WDR75Q8IWA0 830 aaKnown RBP5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 CNTD1Q8N815 330 aa5.43□□□□□ -1.54
LSM6P2-201ENST00000552208 NPLOC4Q8TAT6 608 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms