RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 RIOX2Q8IUF8 465 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 CLEC10AQ8IUN9 316 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 SPICE1Q8N0Z3 855 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 REPS2Q8NFH8 660 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 MFSD14AQ96MC6 490 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 LMCD1Q9NZU5 365 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 LRP2BPQ9P2M1 347 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
SLC48A1-209ENST00000552003 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 BAG3O95817 575 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 SLC25A27O95847 323 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 IRS1P35568 1242 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 PTPN5P54829 565 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 PSMC6P62333 389 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 ITGA7Q13683 1181 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 KCTD2Q14681 263 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 EHD4Q9H223 541 aa12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 PRKRIP1Q9H875 184 aaPredicted RBP12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 ZNF214Q9UL59 606 aaPredicted RBP12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
SLC48A1-209ENST00000552003 ABCB7O75027 752 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 CYP2C9P11712 490 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 PLCG2P16885 1265 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 TMEM63BQ5T3F8 832 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 PHOSPHO2Q8TCD6 241 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 NEUROD6Q96NK8 337 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 SLC9A7Q96T83 725 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 MUTYHQ9UIF7 546 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 COL4A6Q14031 1691 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 ZNF536O15090 1300 aa12.53□□□□□ -0.4
SLC48A1-209ENST00000552003 CYP2E1P05181 493 aaPredicted RBP12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 STAT3P40763 770 aa12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 GABPAQ06546 454 aa12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 DIEXFQ68CQ4 756 aaKnown RBP12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 MSL3Q8N5Y2 521 aaKnown RBP12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 NOL10Q9BSC4 688 aaKnown RBP12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 CABP5Q9NP86 173 aa12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 TRMT13Q9NUP7 481 aaKnown RBP12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 MTUS1Q9ULD2 1270 aa12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 SIP14410 1827 aa12.52□□□□□ -0.41
SLC48A1-209ENST00000552003 DMXL1Q9Y485 3027 aa12.51□□□□□ -0.41
SLC48A1-209ENST00000552003 BAHCC1Q9P281 2608 aa12.51□□□□□ -0.41
SLC48A1-209ENST00000552003 VWA5AO00534 786 aa12.51□□□□□ -0.41
SLC48A1-209ENST00000552003 ASCL5Q7RTU5 278 aa12.51□□□□□ -0.41
SLC48A1-209ENST00000552003 PIH1D3Q9NQM4 214 aaKnown RBP12.51□□□□□ -0.41
SLC48A1-209ENST00000552003 GNEQ9Y223 722 aaKnown RBP12.51□□□□□ -0.41
SLC48A1-209ENST00000552003 TRIP12Q14669 1992 aaPredicted RBP12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 PFKMP08237 780 aa12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 GPNMBQ14956 572 aa12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 TCTN1Q2MV58 587 aa12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 HERC4Q5GLZ8 1057 aaPredicted RBP12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 BMP8AQ7Z5Y6 402 aa12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 MIGA1Q8NAN2 632 aa12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 ALDH8A1Q9H2A2 487 aaPredicted RBP12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 DDX49Q9Y6V7 483 aaKnown RBP12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 CFAP47Q6ZTR5 3102 aa12.5□□□□□ -0.41
SLC48A1-209ENST00000552003 TANC1Q9C0D5 1861 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 ERVK-21P61565 698 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 ERMP1Q7Z2K6 904 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 ADHFE1Q8IWW8 467 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 ABHD16BQ9H3Z7 469 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 VCPKMTQ9H867 229 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 SPC25Q9HBM1 224 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 AKAP2Q9Y2D5 859 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 TMX2Q9Y320 296 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 ZNF292O60281 2723 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 ATG2AQ2TAZ0 1938 aa12.49□□□□□ -0.41
SLC48A1-209ENST00000552003 LINC01553A4QN01 128 aa12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 ANP32CO43423 234 aa12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 VCPP55072 806 aaKnown RBP12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 DEFB103AP81534 67 aa12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 COL19A1Q14993 1142 aa12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 ARMCX2Q7L311 632 aa12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 ZNF467Q7Z7K2 595 aaPredicted RBP12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 RNF135Q8IUD6 432 aa12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 EDAQ92838 391 aa12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 PRKAG3Q9UGI9 489 aa12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 EP300Q09472 2414 aaPredicted RBP12.48□□□□□ -0.41
SLC48A1-209ENST00000552003 CHD6Q8TD26 2715 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 ACACBO00763 2458 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 PTPRCP08575 1304 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 SOWAHBA6NEL2 793 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 TMEM221A6NGB7 291 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 KIF28PB7ZC32 967 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 M0R296 226 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 MPHOSPH10O00566 681 aaKnown RBP12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 CABYRO75952 493 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 IQCF3P0C7M6 154 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms