RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 SYNPO2Q9UMS6 1093 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 ARVCFO00192 962 aa16.94■□□□□ 0.3
CHMP1A-210ENST00000551981 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-210ENST00000551981 CHD9Q3L8U1 2897 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 GSG1L2A8MUP6 293 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 CSF2RAP15509 400 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 TDO2P48775 406 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 TMEM240Q5SV17 173 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 USP38Q8NB14 1042 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 MKL1Q969V6 931 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
CHMP1A-210ENST00000551981 IGKV6D-41A0A0C4DH26 115 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 ADCY6O43306 1168 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 TTLL1O95922 423 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 FDX1P10109 184 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 GNAT2P19087 354 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 RASIP1Q5U651 963 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 C16orf59Q7L2K0 433 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 FAM126BQ8IXS8 530 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 CCDC144CPQ8IYA2 1237 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 GMCL1P1Q8NEA9 526 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 APPBP2Q92624 585 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 PBX4Q9BYU1 374 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 PPP1R12CQ9BZL4 782 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 MTIF3Q9H2K0 278 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 MSRAQ9UJ68 235 aa16.92■□□□□ 0.3
CHMP1A-210ENST00000551981 MYO9BQ13459 2157 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 TNFRSF10AO00220 468 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 APPP05067 770 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 BMP3P12645 472 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 RAB30Q15771 203 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 AKNAD1Q5T1N1 836 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 ZNF365Q70YC5 407 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 NOL8Q76FK4 1167 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 FGD4Q96M96 766 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 ACAD9Q9H845 621 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 HOMER2Q9NSB8 354 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 MTMR4Q9NYA4 1195 aa16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-210ENST00000551981 GRXCR1A8MXD5 290 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 SMARCA5O60264 1052 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 PRDM1O75626 825 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 CABYRO75952 493 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 ACRP10323 421 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 PBX2P40425 430 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 NKX3-2P78367 333 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 TNFAIP2Q03169 654 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 LRRC47Q8N1G4 583 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 ATXN2LQ8WWM7 1075 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 PPM1EQ8WY54 764 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 OSBP2Q969R2 916 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 IL23AQ9NPF7 189 aa16.9■□□□□ 0.3
CHMP1A-210ENST00000551981 ASB14A6NK59 587 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 GPAA1O43292 621 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 CD4P01730 458 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 SLC3A2P08195 630 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 TSPY3P0CV98 308 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 TSPY8P0CW00 308 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 CYP2C18P33260 490 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 STAT2P52630 851 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 SEZ6LQ9BYH1 1024 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 KATNBL1Q9H079 304 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 AP5M1Q9H0R1 490 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 PRDM12Q9H4Q4 367 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 EPB41L4AQ9HCS5 686 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 THEGQ9P2T0 379 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 BDP1A6H8Y1 2624 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 PLIN4Q96Q06 1357 aa16.89■□□□□ 0.29
CHMP1A-210ENST00000551981 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 CTAGE5O15320 804 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 ZEB2O60315 1214 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 BEX3Q00994 111 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 CNTN2Q02246 1040 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 PDE4BQ07343 736 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 TKFCQ3LXA3 575 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 PPP4R3BQ5MIZ7 849 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 FAM160B2Q86V87 743 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 CHURC1Q8WUH1 139 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 HERVK_113Q902F9 699 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 HIPK3Q9H422 1215 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 RNF146Q9NTX7 359 aa16.88■□□□□ 0.29
CHMP1A-210ENST00000551981 NCOR1O75376 2440 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 GBF1Q92538 1859 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 FGBP02675 491 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 CXCL17Q6UXB2 119 aa16.87■□□□□ 0.29
CHMP1A-210ENST00000551981 TLK2Q86UE8 772 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms