RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 ZNF500O60304 480 aaPredicted RBP17.6■□□□□ 0.41
SCN8A-206ENST00000550891 TTBK2Q6IQ55 1244 aa17.6■□□□□ 0.41
SCN8A-206ENST00000550891 TATDN1Q6P1N9 297 aa17.6■□□□□ 0.41
SCN8A-206ENST00000550891 DCAF4Q8WV16 495 aa17.6■□□□□ 0.41
SCN8A-206ENST00000550891 JMJD4Q9H9V9 463 aa17.6■□□□□ 0.41
SCN8A-206ENST00000550891 HERC5Q9UII4 1024 aaKnown RBP17.6■□□□□ 0.41
SCN8A-206ENST00000550891 MAN1B1Q9UKM7 699 aa17.6■□□□□ 0.41
SCN8A-206ENST00000550891 LMOD1P29536 600 aaPredicted RBP17.6■□□□□ 0.41
SCN8A-206ENST00000550891 CDC25BP30305 580 aa17.6■□□□□ 0.41
SCN8A-206ENST00000550891 MRPL12P52815 198 aaKnown RBP17.6■□□□□ 0.41
SCN8A-206ENST00000550891 NEMFO60524 1076 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 PRR29P0C7W0 189 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 STAT6P42226 847 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 MDM2Q00987 491 aaPredicted RBP17.59■□□□□ 0.41
SCN8A-206ENST00000550891 PPP1R18Q6NYC8 613 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 TBCKQ8TEA7 893 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 TAOK3Q9H2K8 898 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 ZBTB5O15062 677 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 GH2P01242 217 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 PTGS1P23219 599 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.59■□□□□ 0.41
SCN8A-206ENST00000550891 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
SCN8A-206ENST00000550891 CUL5Q93034 780 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 MKL1Q969V6 931 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 PAGE5Q96GU1 130 aa17.59■□□□□ 0.41
SCN8A-206ENST00000550891 ATRNL1Q5VV63 1379 aa17.58■□□□□ 0.41
SCN8A-206ENST00000550891 USP17L10C9JJH3 530 aa17.58■□□□□ 0.41
SCN8A-206ENST00000550891 SERPINC1P01008 464 aa17.58■□□□□ 0.41
SCN8A-206ENST00000550891 OR52Z1P0C646 297 aa17.58■□□□□ 0.41
SCN8A-206ENST00000550891 DNTTIP2Q5QJE6 756 aaKnown RBP17.58■□□□□ 0.41
SCN8A-206ENST00000550891 AGBL3Q8NEM8 1001 aa17.58■□□□□ 0.41
SCN8A-206ENST00000550891 MTFR1LQ9H019 292 aa17.58■□□□□ 0.41
SCN8A-206ENST00000550891 TNNI2P48788 182 aa17.58■□□□□ 0.4
SCN8A-206ENST00000550891 FILIP1Q7Z7B0 1213 aa17.58■□□□□ 0.4
SCN8A-206ENST00000550891 A0A087X0B3 334 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
SCN8A-206ENST00000550891 FAM151AQ8WW52 585 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 GLT8D2Q9H1C3 349 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 F5H6K3 240 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 MARCH6O60337 910 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 PRPHP41219 470 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 KLRC3Q07444 240 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 NT5DC1Q5TFE4 455 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 RRAGBQ5VZM2 374 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 CIAPIN1Q6FI81 312 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 ARHGEF10LQ9HCE6 1279 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 CDK11BP21127 795 aaKnown RBP17.57■□□□□ 0.4
SCN8A-206ENST00000550891 GSDMAQ96QA5 445 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 TMEM60Q9H2L4 133 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 PSTPIP2Q9H939 334 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 TMEM260Q9NX78 707 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 IFNKQ9P0W0 207 aa17.57■□□□□ 0.4
SCN8A-206ENST00000550891 CBFA2T2O43439 604 aa17.56■□□□□ 0.4
SCN8A-206ENST00000550891 CDC25AP30304 524 aa17.56■□□□□ 0.4
SCN8A-206ENST00000550891 ORC2Q13416 577 aaPredicted RBP17.56■□□□□ 0.4
SCN8A-206ENST00000550891 C4orf32Q8N8J7 132 aa17.56■□□□□ 0.4
SCN8A-206ENST00000550891 SHROOM1Q2M3G4 852 aaPredicted RBP17.56■□□□□ 0.4
SCN8A-206ENST00000550891 STAMQ92783 540 aa17.56■□□□□ 0.4
SCN8A-206ENST00000550891 MORC3Q14149 939 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 KARSQ15046 597 aaKnown RBP17.55■□□□□ 0.4
SCN8A-206ENST00000550891 IL17AQ16552 155 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 TMEM266Q2M3C6 531 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 AK8Q96MA6 479 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 GMLQ99445 158 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 RAB34Q9BZG1 259 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 RIC8AQ9NPQ8 531 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 PCDHA1Q9Y5I3 950 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 SARSP49591 514 aaKnown RBP17.55■□□□□ 0.4
SCN8A-206ENST00000550891 CXCL9Q07325 125 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 TNIP1Q15025 636 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 SPDYE2Q495Y8 402 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 NRBP1Q9UHY1 535 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 NRDCO43847 1150 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 CDC37Q16543 378 aaPredicted RBP17.55■□□□□ 0.4
SCN8A-206ENST00000550891 DISC1Q9NRI5 854 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 RMND1Q9NWS8 449 aa17.55■□□□□ 0.4
SCN8A-206ENST00000550891 FANCCQ00597 558 aa17.54■□□□□ 0.4
SCN8A-206ENST00000550891 NCAPHQ15003 741 aa17.54■□□□□ 0.4
SCN8A-206ENST00000550891 CALCRLQ16602 461 aa17.54■□□□□ 0.4
SCN8A-206ENST00000550891 KLHL10Q6JEL2 608 aa17.54■□□□□ 0.4
SCN8A-206ENST00000550891 NAP1L5Q96NT1 182 aaPredicted RBP17.54■□□□□ 0.4
SCN8A-206ENST00000550891 XPO4Q9C0E2 1151 aaKnown RBP17.54■□□□□ 0.4
SCN8A-206ENST00000550891 NDUFB10O96000 172 aa17.54■□□□□ 0.4
SCN8A-206ENST00000550891 BMP3P12645 472 aa17.54■□□□□ 0.4
SCN8A-206ENST00000550891 QRICH1Q2TAL8 776 aa17.54■□□□□ 0.4
SCN8A-206ENST00000550891 GMCL1P1Q8NEA9 526 aa17.54■□□□□ 0.4
SCN8A-206ENST00000550891 COL2A1P02458 1487 aaPredicted RBP17.54■□□□□ 0.4
SCN8A-206ENST00000550891 GTPBP6O43824 516 aaPredicted RBP17.53■□□□□ 0.4
SCN8A-206ENST00000550891 UBASH3AP57075 661 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 UBE2SQ16763 222 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 TPD52L1Q16890 204 aaPredicted RBP17.53■□□□□ 0.4
SCN8A-206ENST00000550891 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 TXKP42681 527 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 GSDMDP57764 484 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 SH3RF1Q7Z6J0 888 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 GMCL1Q96IK5 515 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 BLZF1Q9H2G9 400 aa17.53■□□□□ 0.4
SCN8A-206ENST00000550891 FANCLQ9NW38 375 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms