RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PKN2Q16513 984 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 APOA5Q6Q788 366 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 MICU3Q86XE3 530 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 ADGRF4Q8IZF3 695 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 C22orf23Q9BZE7 217 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 RANBP17Q9H2T7 1088 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 MROH8Q9H579 483 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 IVNS1ABPQ9Y6Y0 642 aa18.9■□□□□ 0.62
CHMP1A-209ENST00000550872 COPB2P35606 906 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 PRMT2P55345 433 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 CCDC144CPQ8IYA2 1237 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 FBXL16Q8N461 479 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 IL17RAQ96F46 866 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 AGBL1Q96MI9 1066 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 AGXT2Q9BYV1 514 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 GABRQQ9UN88 632 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 PTPN22Q9Y2R2 807 aa18.89■□□□□ 0.61
CHMP1A-209ENST00000550872 ZBTB43O43298 467 aa18.88■□□□□ 0.61
CHMP1A-209ENST00000550872 GNAQP50148 359 aa18.88■□□□□ 0.61
CHMP1A-209ENST00000550872 PRKCZQ05513 592 aa18.88■□□□□ 0.61
CHMP1A-209ENST00000550872 FANCBQ8NB91 859 aa18.88■□□□□ 0.61
CHMP1A-209ENST00000550872 JMJD4Q9H9V9 463 aa18.88■□□□□ 0.61
CHMP1A-209ENST00000550872 RIPK3Q9Y572 518 aa18.88■□□□□ 0.61
CHMP1A-209ENST00000550872 ZNF536O15090 1300 aa18.88■□□□□ 0.61
CHMP1A-209ENST00000550872 BAZ2BQ9UIF8 2168 aaKnown RBP18.88■□□□□ 0.61
CHMP1A-209ENST00000550872 ICAM1P05362 532 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 ALAS1P13196 640 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 PTPREP23469 700 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 FLT3LGP49771 235 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 CDC37Q16543 378 aaPredicted RBP18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 FBXO46Q6PJ61 603 aaPredicted RBP18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 RAET1EQ8TD07 263 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 LZTS2Q9BRK4 669 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 BACH2Q9BYV9 841 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 GJD2Q9UKL4 321 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 CCPG1Q9ULG6 757 aa18.87■□□□□ 0.61
CHMP1A-209ENST00000550872 SLC15A5A6NIM6 579 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 GOLGA8AA7E2F4 631 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 GOLGA8BA8MQT2 603 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 STRNO43815 780 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 TOB2Q14106 344 aaPredicted RBP18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 TKFCQ3LXA3 575 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 NBPF11Q86T75 865 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 CHST13Q8NET6 341 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 RIOX1Q9H6W3 641 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 HOMER2Q9NSB8 354 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 PNMA2Q9UL42 364 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 PTCH2Q9Y6C5 1203 aa18.86■□□□□ 0.61
CHMP1A-209ENST00000550872 PLEKHA8P1O95397 391 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 FCER1AP12319 257 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 RBM25P49756 843 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 NEK4P51957 841 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 RCAN1P53805 252 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 KCTD2Q14681 263 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 RTN1Q16799 776 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 SLC35G1Q2M3R5 365 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 QRICH1Q2TAL8 776 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 MORN1Q5T089 497 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 SOCS4Q8WXH5 440 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 TRERF1Q96PN7 1200 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 MMP19Q99542 508 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 LARP6Q9BRS8 491 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 RNF146Q9NTX7 359 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 RBM28Q9NW13 759 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 FBXO40Q9UH90 709 aa18.85■□□□□ 0.61
CHMP1A-209ENST00000550872 CYTH3O43739 400 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 CYP2B6P20813 491 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 SMARCA1P28370 1054 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 RGS2P41220 211 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 METAP2P50579 478 aaKnown RBP eCLIP18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 MAP2K5Q13163 448 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 GRB14Q14449 540 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 HOMER1Q86YM7 354 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 CMTR1Q8N1G2 835 aaKnown RBP18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 SRBD1Q8N5C6 995 aaKnown RBP18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 PIBF1Q8WXW3 757 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 PIGSQ96S52 555 aa18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 ALDH8A1Q9H2A2 487 aaPredicted RBP18.84■□□□□ 0.61
CHMP1A-209ENST00000550872 SMCHD1A6NHR9 2005 aa18.83■□□□□ 0.61
CHMP1A-209ENST00000550872 ZBTB5O15062 677 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 SLC34A2O95436 690 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 TAL1P17542 331 aaPredicted RBP18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 ADORA2AP29274 412 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 PDIA3P30101 505 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 EVCP57679 992 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 IRF5Q13568 498 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 PPP2R5BQ15173 497 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 ANKRD1Q15327 319 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 USH1GQ495M9 461 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 TMTC3Q6ZXV5 915 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 DPP9Q86TI2 863 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 FBXO11Q86XK2 927 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 ABRAQ8N0Z2 381 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 CCDC82Q8N4S0 544 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 USP6NLQ92738 828 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 MTMR8Q96EF0 704 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 DDX11Q96FC9 970 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 SPZ1Q9BXG8 430 aa18.83■□□□□ 0.6
CHMP1A-209ENST00000550872 ACAD9Q9H845 621 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms