RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 NSUN7Q8NE18 718 aaKnown RBP14.07□□□□□ -0.16
ERBB3-216ENST00000550869 ACER1Q8TDN7 264 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 SOCS4Q8WXH5 440 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.07□□□□□ -0.163e-6■■□□□ 14.4
ERBB3-216ENST00000550869 PRO3102Q9H379 93 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
ERBB3-216ENST00000550869 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
ERBB3-216ENST00000550869 RBM27Q9P2N5 1060 aaKnown RBP14.07□□□□□ -0.16
ERBB3-216ENST00000550869 MAD2L2Q9UI95 211 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 GJD2Q9UKL4 321 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.07□□□□□ -0.16
ERBB3-216ENST00000550869 RPTORQ8N122 1335 aa14.07□□□□□ -0.16
ERBB3-216ENST00000550869 F5H6K3 240 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 DHX16O60231 1041 aaKnown RBP14.06□□□□□ -0.16
ERBB3-216ENST00000550869 IFNAR1P17181 557 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 SMARCA1P28370 1054 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 KLRC3Q07444 240 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 NECAB2Q7Z6G3 386 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 RAB11FIP4Q86YS3 637 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 TRMT44Q8IYL2 757 aaKnown RBP14.06□□□□□ -0.16
ERBB3-216ENST00000550869 LRRC47Q8N1G4 583 aaKnown RBP14.06□□□□□ -0.16
ERBB3-216ENST00000550869 NUP133Q8WUM0 1156 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 KIAA1683Q9H0B3 1180 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 ARHGEF10LQ9HCE6 1279 aa14.06□□□□□ -0.16
ERBB3-216ENST00000550869 CWC22Q9HCG8 908 aaKnown RBP14.06□□□□□ -0.16
ERBB3-216ENST00000550869 HMX1Q9NP08 348 aaPredicted RBP14.06□□□□□ -0.16
ERBB3-216ENST00000550869 ALPK3Q96L96 1907 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 XRCC5P13010 732 aaKnown RBP14.05□□□□□ -0.16
ERBB3-216ENST00000550869 FDPSP14324 419 aaKnown RBP14.05□□□□□ -0.16
ERBB3-216ENST00000550869 MAPK4P31152 587 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 KIF5BP33176 963 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 GNAQP50148 359 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 HERVK_113P62684 666 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 ZNF543Q08ER8 600 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 TMTC3Q6ZXV5 915 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 GPRC5AQ8NFJ5 357 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 DCAF4Q8WV16 495 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 GMCL1Q96IK5 515 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 VCPKMTQ9H867 229 aa14.05□□□□□ -0.16
ERBB3-216ENST00000550869 BAZ2BQ9UIF8 2168 aaKnown RBP14.05□□□□□ -0.16
ERBB3-216ENST00000550869 NDUFB10O96000 172 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 PARP1P09874 1014 aaKnown RBP14.04□□□□□ -0.16
ERBB3-216ENST00000550869 HMGN5P82970 282 aaKnown RBP14.04□□□□□ -0.16
ERBB3-216ENST00000550869 SLC35G1Q2M3R5 365 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 ASPRV1Q53RT3 343 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 KIAA1755Q5JYT7 1200 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 SLFN13Q68D06 897 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 USP17L2Q6R6M4 530 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 CCDC144CPQ8IYA2 1237 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 STAG2Q8N3U4 1231 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 SRBD1Q8N5C6 995 aaKnown RBP14.04□□□□□ -0.16
ERBB3-216ENST00000550869 CTCFLQ8NI51 663 aaPredicted RBP14.04□□□□□ -0.16
ERBB3-216ENST00000550869 PAWRQ96IZ0 340 aaKnown RBP14.04□□□□□ -0.16
ERBB3-216ENST00000550869 C12orf42Q96LP6 360 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 NUDT12Q9BQG2 462 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 LZTS2Q9BRK4 669 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 SH2D4AQ9H788 454 aa14.04□□□□□ -0.16
ERBB3-216ENST00000550869 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
ERBB3-216ENST00000550869 CYTH3O43739 400 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 JAK2O60674 1132 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 PLA2G6O60733 806 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 PLEKHA8P1O95397 391 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 ATP2B2Q01814 1243 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 GPATCH4Q5T3I0 446 aaKnown RBP14.03□□□□□ -0.16
ERBB3-216ENST00000550869 MAP3K21Q5TCX8 1036 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 BTNL9Q6UXG8 535 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 RASGRP2Q7LDG7 609 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 RGS22Q8NE09 1264 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 LPAR1Q92633 364 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 P2RX7Q99572 595 aaKnown RBP14.03□□□□□ -0.16
ERBB3-216ENST00000550869 SPZ1Q9BXG8 430 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 RIOX1Q9H6W3 641 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 DAXXQ9UER7 740 aaPredicted RBP14.03□□□□□ -0.16
ERBB3-216ENST00000550869 STK36Q9NRP7 1315 aa14.03□□□□□ -0.16
ERBB3-216ENST00000550869 CNTNAP5Q8WYK1 1306 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 PTPDC1A2A3K4 754 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 CPLX1O14810 134 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 PRPF3O43395 683 aaKnown RBP14.02□□□□□ -0.17
ERBB3-216ENST00000550869 CDKL5O76039 1030 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 USP14P54578 494 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 ERVK-9P63128 1117 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 ERVK-24P63145 666 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 CPLX2Q6PUV4 134 aaKnown RBP14.02□□□□□ -0.17
ERBB3-216ENST00000550869 CCAR1Q8IX12 1150 aaKnown RBP14.02□□□□□ -0.17
ERBB3-216ENST00000550869 TRIB2Q92519 343 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 RNF26Q9BY78 433 aaPredicted RBP14.02□□□□□ -0.17
ERBB3-216ENST00000550869 GOPCQ9HD26 462 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 OGDHLQ9ULD0 1010 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 SMC3Q9UQE7 1217 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 MYH6P13533 1939 aa14.02□□□□□ -0.17
ERBB3-216ENST00000550869 DNAH12Q6ZR08 3092 aa14.01□□□□□ -0.17
ERBB3-216ENST00000550869 KLRF2D3W0D1 207 aa14.01□□□□□ -0.17
ERBB3-216ENST00000550869 HSP90AA1P07900 732 aaKnown RBP14.01□□□□□ -0.17
ERBB3-216ENST00000550869 GJB2P29033 226 aa14.01□□□□□ -0.17
ERBB3-216ENST00000550869 RGS2P41220 211 aa14.01□□□□□ -0.17
ERBB3-216ENST00000550869 SLC1A4P43007 532 aa14.01□□□□□ -0.17
ERBB3-216ENST00000550869 CCNA1P78396 465 aa14.01□□□□□ -0.17
ERBB3-216ENST00000550869 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms