RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 RRP36Q96EU6 259 aaKnown RBP10.49□□□□□ -0.73
TMEM116-213ENST00000550831 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
TMEM116-213ENST00000550831 ZKSCAN5Q9Y2L8 839 aa10.49□□□□□ -0.73
TMEM116-213ENST00000550831 BAZ2BQ9UIF8 2168 aaKnown RBP10.48□□□□□ -0.73
TMEM116-213ENST00000550831 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 ACTN4O43707 911 aaKnown RBP10.48□□□□□ -0.73
TMEM116-213ENST00000550831 ZNF500O60304 480 aaPredicted RBP10.48□□□□□ -0.73
TMEM116-213ENST00000550831 PRPHP41219 470 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 LONRF3Q496Y0 759 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 C9orf131Q5VYM1 1079 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 SH3BP5LQ7L8J4 393 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 KRT25Q7Z3Z0 450 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 SH3RF1Q7Z6J0 888 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 TEX2Q8IWB9 1127 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 DHX40Q8IX18 779 aaKnown RBP10.48□□□□□ -0.73
TMEM116-213ENST00000550831 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
TMEM116-213ENST00000550831 CCDC34Q96HJ3 373 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 MRFAP1L1Q96HT8 127 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 KANSL2Q9H9L4 492 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 C6orf50Q9HD87 102 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
TMEM116-213ENST00000550831 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 PCDHA6Q9UN73 950 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 PCDHA8Q9Y5H6 950 aa10.48□□□□□ -0.73
TMEM116-213ENST00000550831 COL4A5P29400 1685 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 DDTLA6NHG4 134 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-213ENST00000550831 USP17L5A8MUK1 530 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 LONP1P36776 959 aaKnown RBP10.47□□□□□ -0.73
TMEM116-213ENST00000550831 GRIN1Q05586 938 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 SEMA3FQ13275 785 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 CFAP100Q494V2 611 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 COL13A1Q5TAT6 717 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-213ENST00000550831 USP17L2Q6R6M4 530 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 PIK3AP1Q6ZUJ8 805 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 TMEM179Q6ZVK1 233 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 ZFPM1Q8IX07 1006 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 CNNM3Q8NE01 707 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 DCAF4Q8WV16 495 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 ZBED3Q96IU2 234 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-213ENST00000550831 CSRNP2Q9H175 543 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 SEC63Q9UGP8 760 aaKnown RBP10.47□□□□□ -0.73
TMEM116-213ENST00000550831 HERC5Q9UII4 1024 aaKnown RBP10.47□□□□□ -0.73
TMEM116-213ENST00000550831 HDAC9Q9UKV0 1011 aa10.47□□□□□ -0.73
TMEM116-213ENST00000550831 PNMA6FA0A0J9YX94 578 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 CCDC194A0A1B0GVG4 234 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 SMTNL1A8MU46 457 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 GOLGA6L19H0YKK7 550 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 WNT7AO00755 349 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 TBC1D12O60347 775 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 SLFN14P0C7P3 912 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 ZNF75DP51815 510 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 HTRA3P83110 453 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 MAP3K10Q02779 954 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 PTGDRQ13258 359 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 ZRSR1Q15695 479 aaKnown RBP10.46□□□□□ -0.74
TMEM116-213ENST00000550831 CERKLQ49MI3 558 aaPredicted RBP10.46□□□□□ -0.74
TMEM116-213ENST00000550831 GMCL1P1Q8NEA9 526 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.74
TMEM116-213ENST00000550831 PRMT6Q96LA8 375 aaPredicted RBP10.46□□□□□ -0.74
TMEM116-213ENST00000550831 GLT8D2Q9H1C3 349 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 PIM2Q9P1W9 311 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 CLIP2Q9UDT6 1046 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 ZNRF3Q9ULT6 936 aa10.46□□□□□ -0.74
TMEM116-213ENST00000550831 LTBP3Q9NS15 1303 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 BECN2A8MW95 431 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 GOLGA6L6A8MZA4 724 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 PSMD14O00487 310 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 ADAMTS3O15072 1205 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 POLR2DO15514 142 aaKnown RBP10.45□□□□□ -0.74
TMEM116-213ENST00000550831 GOLGA8HP0CJ92 632 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 NAPAP54920 295 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 POSTNQ15063 836 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 ZNF174Q15697 407 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 E2F4Q16254 413 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 DPCR1Q3MIW9 517 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 NOM1Q5C9Z4 860 aaKnown RBP10.45□□□□□ -0.74
TMEM116-213ENST00000550831 HEATR3Q7Z4Q2 680 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 FAM83AQ86UY5 434 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 LARGE2Q8N3Y3 721 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 FAM151AQ8WW52 585 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 PIGSQ96S52 555 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 PCDHA5Q9Y5H7 936 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 PCDHAC2Q9Y5I4 1007 aa10.45□□□□□ -0.74
TMEM116-213ENST00000550831 SMCO2A6NFE2 343 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 PPP1R37O75864 691 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 MSNP26038 577 aaKnown RBP10.44□□□□□ -0.74
TMEM116-213ENST00000550831 CLK2P49760 499 aaKnown RBP10.44□□□□□ -0.74
TMEM116-213ENST00000550831 RBM5P52756 815 aaKnown RBP eCLIP10.44□□□□□ -0.74
TMEM116-213ENST00000550831 MORC3Q14149 939 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 NCAPHQ15003 741 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 NONOQ15233 471 aaKnown RBP eCLIP10.44□□□□□ -0.74
TMEM116-213ENST00000550831 SIAH1Q8IUQ4 282 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 TNS4Q8IZW8 715 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 MLKLQ8NB16 471 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 SYMPKQ92797 1274 aaKnown RBP10.44□□□□□ -0.74
TMEM116-213ENST00000550831 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 AK8Q96MA6 479 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 CCSER1Q9C0I3 900 aa10.44□□□□□ -0.74
TMEM116-213ENST00000550831 TDRD3Q9H7E2 651 aaKnown RBP10.44□□□□□ -0.74
TMEM116-213ENST00000550831 JMJD4Q9H9V9 463 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms