RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 ZNF296Q8WUU4 475 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-216ENST00000550391 PIBF1Q8WXW3 757 aa16.29■□□□□ 0.2
CACNB3-216ENST00000550391 WNK4Q96J92 1243 aa16.29■□□□□ 0.2
CACNB3-216ENST00000550391 RPAP3Q9H6T3 665 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-216ENST00000550391 SEC63Q9UGP8 760 aaKnown RBP16.29■□□□□ 0.2
CACNB3-216ENST00000550391 PRR12Q9ULL5 1215 aa16.29■□□□□ 0.2
CACNB3-216ENST00000550391 BRD1O95696 1058 aa16.28■□□□□ 0.2
CACNB3-216ENST00000550391 FOSBP53539 338 aa16.28■□□□□ 0.2
CACNB3-216ENST00000550391 HOMER1Q86YM7 354 aa16.28■□□□□ 0.2
CACNB3-216ENST00000550391 PROCA1Q8NCQ7 364 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-216ENST00000550391 FBXO18Q8NFZ0 1043 aa16.28■□□□□ 0.2
CACNB3-216ENST00000550391 MTMR6Q9Y217 621 aa16.28■□□□□ 0.2
CACNB3-216ENST00000550391 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
CACNB3-216ENST00000550391 CUL9Q8IWT3 2517 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 RLFQ13129 1914 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 PNMA6FA0A0J9YX94 578 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 VPS37CA5D8V6 355 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-216ENST00000550391 ZBTB5O15062 677 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 ZSCAN22P10073 491 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-216ENST00000550391 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-216ENST00000550391 MOGSQ13724 837 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 CDC37Q16543 378 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-216ENST00000550391 CATSPERGQ6ZRH7 1159 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 FAM177A1Q8N128 213 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-216ENST00000550391 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 SLF1Q9BQI6 1058 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 GJB4Q9NTQ9 266 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
CACNB3-216ENST00000550391 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 hCG_1984214I3L0E3 225 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 ZBTB48P10074 688 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-216ENST00000550391 GUCY1B3Q02153 619 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 SNAPC2Q13487 334 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 QRICH1Q2TAL8 776 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 SPRYD7Q5W111 196 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 KRT40Q6A162 431 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 WWC2Q6AWC2 1192 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 ZNF713Q8N859 430 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-216ENST00000550391 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
CACNB3-216ENST00000550391 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
CACNB3-216ENST00000550391 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 RANBP17Q9H2T7 1088 aaKnown RBP16.26■□□□□ 0.19
CACNB3-216ENST00000550391 BARHL2Q9NY43 387 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 VPS54Q9P1Q0 977 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 PPP1R9AQ9ULJ8 1098 aa16.26■□□□□ 0.19
CACNB3-216ENST00000550391 STXBP3O00186 592 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
CACNB3-216ENST00000550391 FLOT1O75955 427 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 GTF2A2P52657 109 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 TREML2Q5T2D2 321 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 GADL1Q6ZQY3 521 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
CACNB3-216ENST00000550391 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 RASAL3Q86YV0 1011 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 MS4A4AQ96JQ5 239 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 PHF20Q9BVI0 1012 aa16.25■□□□□ 0.19
CACNB3-216ENST00000550391 MYPNQ86TC9 1320 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 MMP1P03956 469 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 FDX1P10109 184 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 HOXA7P31268 230 aaPredicted RBP16.24■□□□□ 0.19
CACNB3-216ENST00000550391 DSG3P32926 999 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 SNAP25P60880 206 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 TRAF1Q13077 416 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 COG2Q14746 738 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNB3-216ENST00000550391 FOXD4L5Q5VV16 416 aaPredicted RBP16.24■□□□□ 0.19
CACNB3-216ENST00000550391 GPAT2Q6NUI2 795 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 TYW1BQ6NUM6 668 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 CCDC148Q8NFR7 591 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 CCDC12Q8WUD4 166 aaPredicted RBP16.24■□□□□ 0.19
CACNB3-216ENST00000550391 FOXD4L4Q8WXT5 416 aaPredicted RBP16.24■□□□□ 0.19
CACNB3-216ENST00000550391 ADAMTS5Q9UNA0 930 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 KCNJ14Q9UNX9 436 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
CACNB3-216ENST00000550391 GPR25O00155 361 aa16.23■□□□□ 0.19
CACNB3-216ENST00000550391 F13A1P00488 732 aa16.23■□□□□ 0.19
CACNB3-216ENST00000550391 CETPP11597 493 aa16.23■□□□□ 0.19
CACNB3-216ENST00000550391 CALML3P27482 149 aa16.23■□□□□ 0.19
CACNB3-216ENST00000550391 NLRP5P59047 1200 aa16.23■□□□□ 0.19
CACNB3-216ENST00000550391 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
CACNB3-216ENST00000550391 FBXO11Q86XK2 927 aa16.23■□□□□ 0.19
CACNB3-216ENST00000550391 COA7Q96BR5 231 aa16.23■□□□□ 0.19
CACNB3-216ENST00000550391 ZSCAN16Q9H4T2 348 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-216ENST00000550391 POTEFA5A3E0 1075 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 NAPAP54920 295 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 MKRN3Q13064 507 aaKnown RBP16.22■□□□□ 0.19
CACNB3-216ENST00000550391 RESTQ13127 1097 aa16.22■□□□□ 0.19
CACNB3-216ENST00000550391 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.19
CACNB3-216ENST00000550391 NPY5RQ15761 445 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms