RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 NDUFA10O95299 355 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 IDEP14735 1019 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 LIFRP42702 1097 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 UBE3CQ15386 1083 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 WHAMMP3Q1A5X7 153 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 TTC38Q5R3I4 469 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 NBPF5PQ86XG9 351 aaPredicted RBP12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 SMCR8Q8TEV9 937 aaPredicted RBP12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 CNNM2Q9H8M5 875 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 FAM237AA0A1B0GTK4 181 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 GSG1L2A8MUP6 293 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 CYP7A1P22680 504 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 SLC7A5Q01650 507 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 APTXQ7Z2E3 356 aaKnown RBP12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 RASGRP4Q8TDF6 673 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 JAKMIP2Q96AA8 810 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 SMARCAL1Q9NZC9 954 aa12.06□□□□□ -0.48
SMARCC2-208ENST00000550150 PLSCR1O15162 318 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 FGFR2P21802 821 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 KCTD19Q17RG1 926 aaPredicted RBP12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 MSANTD4Q8NCY6 345 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 PP2D1A8MPX8 630 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 KLK7P49862 253 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 CCDC96Q2M329 555 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 PRR5LQ6MZQ0 368 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 DEFB132Q7Z7B7 95 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 ANKRD13CQ8N6S4 541 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 IQUBQ8NA54 791 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 JAG2Q9Y219 1238 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 SAMM50Q9Y512 469 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 PNPLA7Q6ZV29 1317 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 B4DLN1 442 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 NMT2O60551 498 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 MYBL2P10244 700 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 STAT6P42226 847 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 ARHGAP25P42331 645 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 ENOX2Q16206 610 aaKnown RBP12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 NT5DC1Q5TFE4 455 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 SND1Q7KZF4 910 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 HNRNPLLQ8WVV9 542 aaKnown RBP12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 FAM107BQ9H098 131 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 RAB21Q9UL25 225 aa12.05□□□□□ -0.48
SMARCC2-208ENST00000550150 COL1A1P02452 1464 aaPredicted RBP12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 PRCPP42785 496 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 MAP9Q49MG5 647 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 TCP11X2Q5H9J9 407 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 DHX37Q8IY37 1157 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 COL11A2P13942 1736 aaPredicted RBP12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 GOLGA6CA6NDK9 693 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 ZEB2O60315 1214 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 GOLGA6DP0CG33 693 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 RNASE9P60153 205 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 SLC20A2Q08357 652 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 FAM47AQ5JRC9 791 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 SLC10A5Q5PT55 438 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 KCTD16Q68DU8 428 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 RUFY1Q96T51 708 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 CENPHQ9H3R5 247 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 AGPAT5Q9NUQ2 364 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 ZNHIT6Q9NWK9 470 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 GOLGA6AQ9NYA3 693 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 PSD3Q9NYI0 1048 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 XDHP47989 1333 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 WDR19Q8NEZ3 1342 aa12.04□□□□□ -0.48
SMARCC2-208ENST00000550150 SLC5A1P13866 664 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 CHRNDQ07001 517 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 SF3B3Q15393 1217 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 CCDC152Q4G0S7 254 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 CDKAL1Q5VV42 579 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 KRT26Q7Z3Y9 468 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 OR8K1Q8NGG5 319 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 DEF6Q9H4E7 631 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 AATFQ9NY61 560 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 TFCP2L1Q9NZI6 479 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 EHD2Q9NZN4 543 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 JRKLQ9Y4A0 524 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 RTL9Q8NET4 1388 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 GOLGA6BA6NDN3 693 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 POLRMTO00411 1230 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 PARP1P09874 1014 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 USP5P45974 858 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 ATP1A2P50993 1020 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 PUM3Q15397 648 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 FAM76AQ8TAV0 307 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 ESR2Q92731 530 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 SHISA4Q96DD7 197 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 LACRTQ9GZZ8 138 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 RGPD3A6NKT7 1758 aaPredicted RBP12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 RGPD4Q7Z3J3 1758 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 FAM170AA1A519 330 aa12.03□□□□□ -0.48
SMARCC2-208ENST00000550150 H0YHG0 523 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms