RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 CDHR2Q9BYE9 1310 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 POLRMTO00411 1230 aaKnown RBP8.09□□□□□ -1.11
COX6A1-202ENST00000549525 IRS4O14654 1257 aaPredicted RBP8.09□□□□□ -1.11
COX6A1-202ENST00000549525 GADD45BO75293 160 aaPredicted RBP8.09□□□□□ -1.11
COX6A1-202ENST00000549525 HMMRO75330 724 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 ZBTB7AO95365 584 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 ESRRAP11474 423 aaPredicted RBP8.09□□□□□ -1.11
COX6A1-202ENST00000549525 NOS3P29474 1203 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 ALDH1B1P30837 517 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 TGFB2P61812 414 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 NRG1Q02297 640 aaPredicted RBP8.09□□□□□ -1.11
COX6A1-202ENST00000549525 IKBKEQ14164 716 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 SUSD4Q5VX71 490 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
COX6A1-202ENST00000549525 FAM117BQ6P1L5 589 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 UBE3BQ7Z3V4 1068 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 TXNRD3Q86VQ6 643 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 AMIGO3Q86WK7 504 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 PANK1Q8TE04 598 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 SLC7A3Q8WY07 619 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 WNT8BQ93098 351 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 FAM89AQ96GI7 184 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 PLA2G12BQ9BX93 195 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 USP44Q9H0E7 712 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 PPP1R1BQ9UD71 204 aaPredicted RBP8.09□□□□□ -1.11
COX6A1-202ENST00000549525 CD2APQ9Y5K6 639 aa8.09□□□□□ -1.11
COX6A1-202ENST00000549525 ANKRD33BA6NCL7 494 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 F8W735 103 aaPredicted RBP8.08□□□□□ -1.12
COX6A1-202ENST00000549525 H0YIN7 160 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 ALX3O95076 343 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 NTSR2O95665 410 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 ITPKAP23677 461 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 CCDC57Q2TAC2 916 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.08□□□□□ -1.12
COX6A1-202ENST00000549525 SMIM5Q71RC9 77 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 RPAP2Q8IXW5 612 aaPredicted RBP8.08□□□□□ -1.12
COX6A1-202ENST00000549525 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 RPGRQ92834 1020 aaKnown RBP8.08□□□□□ -1.12
COX6A1-202ENST00000549525 MRPL18Q9H0U6 180 aaKnown RBP8.08□□□□□ -1.12
COX6A1-202ENST00000549525 ZNF576Q9H609 170 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 OSGEPQ9NPF4 335 aa8.08□□□□□ -1.12
COX6A1-202ENST00000549525 UBN2Q6ZU65 1347 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 RLBP1P12271 317 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 IREB2P48200 963 aaKnown RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 IFIT5Q13325 482 aaKnown RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 DOC2BQ14184 412 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 SUZ12Q15022 739 aaKnown RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 SF3B3Q15393 1217 aaKnown RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 ZNF423Q2M1K9 1284 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 HSP90AB4PQ58FF6 505 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 TAF7LQ5H9L4 462 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 PRR5LQ6MZQ0 368 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 DDX46Q7L014 1031 aaKnown RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 AGGF1Q8N302 714 aaeCLIP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 TMEM130Q8N3G9 435 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 UBASH3BQ8TF42 649 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 RBM17Q96I25 401 aaKnown RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 CDC5LQ99459 802 aaKnown RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 SSBP4Q9BWG4 385 aaPredicted RBP8.07□□□□□ -1.12
COX6A1-202ENST00000549525 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 ZBTB40Q9NUA8 1239 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 NUP98P52948 1817 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 SCN7AQ01118 1682 aa8.07□□□□□ -1.12
COX6A1-202ENST00000549525 RIC1Q4ADV7 1423 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 TMEM238LA0A1B0GVL6 79 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 KLRG2A4D1S0 409 aaPredicted RBP8.06□□□□□ -1.12
COX6A1-202ENST00000549525 BBOX1O75936 387 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 NBPF7P0C2Y1 421 aaPredicted RBP8.06□□□□□ -1.12
COX6A1-202ENST00000549525 NPR1P16066 1061 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 CTSWP56202 376 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 NLRP12P59046 1061 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 PCDH1Q08174 1060 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 DDR1Q08345 913 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 C19orf57Q0VDD7 668 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 KIAA1211Q6ZU35 1233 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 MASTLQ96GX5 879 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 MEIS3Q99687 375 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 BCO2Q9BYV7 579 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 CLEC4MQ9H2X3 399 aaPredicted RBP8.06□□□□□ -1.12
COX6A1-202ENST00000549525 RWDD1Q9H446 243 aaPredicted RBP8.06□□□□□ -1.12
COX6A1-202ENST00000549525 AKTIPQ9H8T0 292 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 BCORQ6W2J9 1755 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 ARFGEF2Q9Y6D5 1785 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 C4AP0C0L4 1744 aa8.06□□□□□ -1.12
COX6A1-202ENST00000549525 ANKRD18BA2A2Z9 1011 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 CSF1RP07333 972 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 HCLS1P14317 486 aaPredicted RBP8.05□□□□□ -1.12
COX6A1-202ENST00000549525 IGHMBP2P38935 993 aaKnown RBP8.05□□□□□ -1.12
COX6A1-202ENST00000549525 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
COX6A1-202ENST00000549525 C20orf194Q5TEA3 1177 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 SOGA3Q5TF21 947 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 STYK1Q6J9G0 422 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 LMBR1LQ6UX01 489 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 Q6ZS46 218 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 NPAS4Q8IUM7 802 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 FBF1Q8TES7 1133 aa8.05□□□□□ -1.12
COX6A1-202ENST00000549525 MEGF10Q96KG7 1140 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms