RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MTMR7Q9Y216 660 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 CUL9Q8IWT3 2517 aa14.26□□□□□ -0.13
TRAFD1-205ENST00000548277 TCF20Q9UGU0 1960 aaKnown RBP14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 TMEM232C9JQI7 657 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 CSF2RAP15509 400 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 PTGS1P23219 599 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 PBX2P40425 430 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 C16orf59Q7L2K0 433 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 CCDC144CPQ8IYA2 1237 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 IFNL3Q8IZI9 196 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 MSL3Q8N5Y2 521 aaKnown RBP14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 PCSK9Q8NBP7 692 aaKnown RBP14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 FGD4Q96M96 766 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 ABHD16BQ9H3Z7 469 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 ZNF576Q9H609 170 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 SLC38A10Q9HBR0 1119 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 PRDM6Q9NQX0 595 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 MTMR4Q9NYA4 1195 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 CDH23Q9H251 3354 aa14.25□□□□□ -0.13
TRAFD1-205ENST00000548277 IGKV6D-41A0A0C4DH26 115 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 ARVCFO00192 962 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 TTLL1O95922 423 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 TSPY3P0CV98 308 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 TSPY8P0CW00 308 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 BMP3P12645 472 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 CYP2C18P33260 490 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 TFAP4Q01664 338 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 TMEM240Q5SV17 173 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 MFSD5Q6N075 450 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 GIMAP6Q6P9H5 292 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 CCDC174Q6PII3 467 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 ZNF365Q70YC5 407 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 EEPD1Q7L9B9 569 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 MKL1Q969V6 931 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 TIFAQ96CG3 184 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 AGBL1Q96MI9 1066 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 INCENPQ9NQS7 918 aa14.24□□□□□ -0.13
TRAFD1-205ENST00000548277 ELP1O95163 1332 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 A0A0U1RQG5 324 aaPredicted RBP14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 ATP2A1O14983 1001 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 ALAS1P13196 640 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 MCCP23508 829 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 CDK7P50613 346 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 GJA9P57773 515 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 PPIGQ13427 754 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 CXCL17Q6UXB2 119 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 TMEM199Q8N511 208 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 CHST13Q8NET6 341 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 GPATCH3Q96I76 525 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 FBXO40Q9UH90 709 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 TBX21Q9UL17 535 aa14.23□□□□□ -0.13
TRAFD1-205ENST00000548277 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 MROH7Q68CQ1 1323 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 TLR3O15455 904 aaKnown RBP14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 GNAT2P19087 354 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 TNFAIP2Q03169 654 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 CCDC85BQ15834 202 aaPredicted RBP14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 KCTD1Q719H9 257 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 TRERF1Q96PN7 1200 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 PBX4Q9BYU1 374 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 PRDM12Q9H4Q4 367 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 PDGFCQ9NRA1 345 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 RNF146Q9NTX7 359 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 SCN5AQ14524 2016 aa14.22□□□□□ -0.13
TRAFD1-205ENST00000548277 LCTP09848 1927 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 PRUNE2Q8WUY3 3088 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 TMEM265A0A087WTH1 108 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 SOWAHBA6NEL2 793 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 CTAGE5O15320 804 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 DYNC1LI2O43237 492 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 ZFYP08048 801 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 CST5P28325 142 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 SLC1A4P43007 532 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 STAT2P52630 851 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 CCL23P55773 120 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 CTDSPL2Q05D32 466 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 PDE4BQ07343 736 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 TMEM63BQ5T3F8 832 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 FAM126BQ8IXS8 530 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 NEDD1Q8NHV4 660 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 PURBQ96QR8 312 aaKnown RBP14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 GAS2L1Q99501 681 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 NACAP1Q9BZK3 213 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 KATNBL1Q9H079 304 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 NAPBQ9H115 298 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 UPF3AQ9H1J1 476 aaKnown RBP14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 DCTPP1Q9H773 170 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 ACAD9Q9H845 621 aa14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 TRIP12Q14669 1992 aaPredicted RBP14.21□□□□□ -0.13
TRAFD1-205ENST00000548277 ASTN1O14525 1302 aa14.2□□□□□ -0.14
TRAFD1-205ENST00000548277 UMODL1Q5DID0 1318 aa14.2□□□□□ -0.14
TRAFD1-205ENST00000548277 NMT2O60551 498 aa14.2□□□□□ -0.14
TRAFD1-205ENST00000548277 IGFBP4P22692 258 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms