RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 NONOQ15233 471 aaKnown RBP eCLIP14.15□□□□□ -0.14
RAB5B-204ENST00000548068 PTPAQ15257 358 aa14.15□□□□□ -0.14
RAB5B-204ENST00000548068 ZYXQ15942 572 aaKnown RBP14.15□□□□□ -0.14
RAB5B-204ENST00000548068 TTC38Q5R3I4 469 aa14.15□□□□□ -0.14
RAB5B-204ENST00000548068 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
RAB5B-204ENST00000548068 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
RAB5B-204ENST00000548068 FBXO11Q86XK2 927 aa14.15□□□□□ -0.14
RAB5B-204ENST00000548068 PGBD1Q96JS3 809 aa14.15□□□□□ -0.14
RAB5B-204ENST00000548068 RIC8AQ9NPQ8 531 aa14.15□□□□□ -0.14
RAB5B-204ENST00000548068 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.15□□□□□ -0.14
RAB5B-204ENST00000548068 DDX19AQ9NUU7 478 aaKnown RBP14.15□□□□□ -0.14
RAB5B-204ENST00000548068 CSADQ9Y600 493 aa14.15□□□□□ -0.14
RAB5B-204ENST00000548068 C19orf81C9J6K1 198 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 ADM5C9JUS6 153 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 CUTAO60888 179 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 TOB1P50616 345 aaPredicted RBP14.14□□□□□ -0.15
RAB5B-204ENST00000548068 ORC2Q13416 577 aaPredicted RBP14.14□□□□□ -0.15
RAB5B-204ENST00000548068 PRAMEF18Q5VWM3 479 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 KRI1Q8N9T8 703 aaKnown RBP14.14□□□□□ -0.15
RAB5B-204ENST00000548068 ZNF280CQ8ND82 737 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.14□□□□□ -0.157e-10■■□□□ 14.3
RAB5B-204ENST00000548068 MRPS27Q92552 414 aaKnown RBP14.14□□□□□ -0.15
RAB5B-204ENST00000548068 COA7Q96BR5 231 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.14□□□□□ -0.15
RAB5B-204ENST00000548068 PNMA2Q9UL42 364 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 PRR12Q9ULL5 1215 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 PCDHA7Q9UN72 937 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 PCDHA6Q9UN73 950 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 PCDHA8Q9Y5H6 950 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 PCDHA1Q9Y5I3 950 aa14.14□□□□□ -0.15
RAB5B-204ENST00000548068 USP2O75604 605 aaPredicted RBP14.13□□□□□ -0.15
RAB5B-204ENST00000548068 FDX1P10109 184 aa14.13□□□□□ -0.15
RAB5B-204ENST00000548068 BACE1P56817 501 aa14.13□□□□□ -0.15
RAB5B-204ENST00000548068 MAP3K9P80192 1104 aa14.13□□□□□ -0.15
RAB5B-204ENST00000548068 MTMR2Q13614 643 aa14.13□□□□□ -0.15
RAB5B-204ENST00000548068 ZSCAN23Q3MJ62 389 aa14.13□□□□□ -0.15
RAB5B-204ENST00000548068 EAPPQ56P03 285 aaPredicted RBP14.13□□□□□ -0.15
RAB5B-204ENST00000548068 CCAR1Q8IX12 1150 aaKnown RBP14.13□□□□□ -0.15
RAB5B-204ENST00000548068 ZKSCAN4Q969J2 545 aaPredicted RBP14.13□□□□□ -0.15
RAB5B-204ENST00000548068 CDCA5Q96FF9 252 aa14.13□□□□□ -0.15
RAB5B-204ENST00000548068 GLIS2Q9BZE0 524 aaPredicted RBP14.13□□□□□ -0.15
RAB5B-204ENST00000548068 TMEM63CQ9P1W3 806 aa14.13□□□□□ -0.15
RAB5B-204ENST00000548068 PCDHB6Q9Y5E3 794 aa14.13□□□□□ -0.15
RAB5B-204ENST00000548068 PPP1R11O60927 126 aaPredicted RBP14.12□□□□□ -0.15
RAB5B-204ENST00000548068 ATP2B1P20020 1258 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 CMA1P23946 247 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 ZNF445P59923 1031 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 FAM160A1Q05DH4 1040 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 TPRNQ4KMQ1 711 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 KIAA1755Q5JYT7 1200 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 CCDC84Q86UT8 332 aaPredicted RBP14.12□□□□□ -0.15
RAB5B-204ENST00000548068 FSIP1Q8NA03 581 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 PRPF38AQ8NAV1 312 aaKnown RBP14.12□□□□□ -0.15
RAB5B-204ENST00000548068 RBM46Q8TBY0 533 aaKnown RBP14.12□□□□□ -0.15
RAB5B-204ENST00000548068 FERMT2Q96AC1 680 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 KIFC2Q96AC6 838 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 C12orf42Q96LP6 360 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 NAP1L4Q99733 375 aaKnown RBP14.12□□□□□ -0.15
RAB5B-204ENST00000548068 SLF1Q9BQI6 1058 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 RANBP17Q9H2T7 1088 aaKnown RBP14.12□□□□□ -0.15
RAB5B-204ENST00000548068 PSTPIP2Q9H939 334 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 TMOD4Q9NZQ9 345 aa14.12□□□□□ -0.15
RAB5B-204ENST00000548068 RBBP6Q7Z6E9 1792 aaKnown RBP14.11□□□□□ -0.15
RAB5B-204ENST00000548068 PARP14Q460N5 1801 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 LAD1O00515 517 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 KINO60870 393 aaKnown RBP14.11□□□□□ -0.15
RAB5B-204ENST00000548068 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
RAB5B-204ENST00000548068 SPP2Q13103 211 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 AP3B2Q13367 1082 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 EARS2Q5JPH6 523 aaKnown RBP14.11□□□□□ -0.15
RAB5B-204ENST00000548068 ARMC9Q7Z3E5 817 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 NEK8Q86SG6 692 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 ZNF579Q8NAF0 562 aaKnown RBP14.11□□□□□ -0.15
RAB5B-204ENST00000548068 RASGRP4Q8TDF6 673 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 TANGO6Q9C0B7 1094 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 NUP62CLQ9H1M0 184 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 CTDP1Q9Y5B0 961 aaPredicted RBP14.11□□□□□ -0.15
RAB5B-204ENST00000548068 ZHX2Q9Y6X8 837 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 ABCB11O95342 1321 aa14.11□□□□□ -0.15
RAB5B-204ENST00000548068 CTAGE5O15320 804 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 LIG1P18858 919 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 VCAM1P19320 739 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 PTPREP23469 700 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 ATP2C1P98194 919 aaPredicted RBP14.1□□□□□ -0.15
RAB5B-204ENST00000548068 PRKG1Q13976 671 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 VGLL4Q14135 290 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 MAP3K11Q16584 847 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 INF2Q27J81 1249 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 AXDND1Q5T1B0 1012 aaPredicted RBP14.1□□□□□ -0.15
RAB5B-204ENST00000548068 ARL6IP4Q66PJ3 421 aaKnown RBP14.1□□□□□ -0.15
RAB5B-204ENST00000548068 ANKRD13AQ8IZ07 590 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 DACT1Q9NYF0 836 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 FAM13BQ9NYF5 915 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 BIN2Q9UBW5 565 aaPredicted RBP14.1□□□□□ -0.15
RAB5B-204ENST00000548068 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 MRPL11Q9Y3B7 192 aaKnown RBP14.1□□□□□ -0.15
RAB5B-204ENST00000548068 SRPRBQ9Y5M8 271 aaKnown RBP14.1□□□□□ -0.15
RAB5B-204ENST00000548068 SNCAIPQ9Y6H5 919 aa14.1□□□□□ -0.15
RAB5B-204ENST00000548068 PTPRFP10586 1907 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms