RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
LINC00661-202ENST00000547102 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-202ENST00000547102 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
LINC00661-202ENST00000547102 PRR12Q9ULL5 1215 aa12.59□□□□□ -0.39
LINC00661-202ENST00000547102 ZMYND8Q9ULU4 1186 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-202ENST00000547102 DNAJC25-GNG10A0A024R161 153 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 ALAS1P13196 640 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 GSPT1P15170 499 aaKnown RBP12.58□□□□□ -0.4
LINC00661-202ENST00000547102 LRRC26Q2I0M4 334 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 GJC2Q5T442 439 aaPredicted RBP12.58□□□□□ -0.4
LINC00661-202ENST00000547102 SYDE2Q5VT97 1194 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 MAMDC4Q6UXC1 1216 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 RASGRP2Q7LDG7 609 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 ZNF467Q7Z7K2 595 aaPredicted RBP12.58□□□□□ -0.4
LINC00661-202ENST00000547102 AGBL1Q96MI9 1066 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 TTC14Q96N46 770 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 XPNPEP3Q9NQH7 507 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
LINC00661-202ENST00000547102 ZHX1Q9UKY1 873 aaPredicted RBP12.58□□□□□ -0.4
LINC00661-202ENST00000547102 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
LINC00661-202ENST00000547102 FRMPD2Q68DX3 1309 aaPredicted RBP12.58□□□□□ -0.4
LINC00661-202ENST00000547102 KDM4AO75164 1064 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 ICAM1P05362 532 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 SYN1P17600 705 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
LINC00661-202ENST00000547102 RNF180Q86T96 592 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 KRT23Q9C075 422 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 CNNM2Q9H8M5 875 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 PNMA2Q9UL42 364 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 FAM184BQ9ULE4 1060 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 ZNF536O15090 1300 aa12.57□□□□□ -0.4
LINC00661-202ENST00000547102 A0A1W2PPC1 479 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 B4E1Z4 1266 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 ZNF865P0CJ78 1059 aaPredicted RBP12.56□□□□□ -0.4
LINC00661-202ENST00000547102 PDHBP11177 359 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 TAL1P17542 331 aaPredicted RBP12.56□□□□□ -0.4
LINC00661-202ENST00000547102 SLC16A2P36021 539 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 SNAP25P60880 206 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 LRRC41Q15345 812 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 TTBK2Q6IQ55 1244 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 BTNL9Q6UXG8 535 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 ARMCX2Q7L311 632 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 DGKHQ86XP1 1220 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 ZKSCAN3Q9BRR0 538 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 UBAC1Q9BSL1 405 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 RANBP17Q9H2T7 1088 aaKnown RBP12.56□□□□□ -0.4
LINC00661-202ENST00000547102 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
LINC00661-202ENST00000547102 PRKAG2Q9UGJ0 569 aa12.56□□□□□ -0.4
LINC00661-202ENST00000547102 ASB14A6NK59 587 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 SNAI1O95863 264 aaPredicted RBP12.55□□□□□ -0.4
LINC00661-202ENST00000547102 PGK1P00558 417 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 FXR1P51114 621 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00661-202ENST00000547102 RTP1P59025 263 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 TRDNQ13061 729 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 GPATCH4Q5T3I0 446 aaKnown RBP12.55□□□□□ -0.4
LINC00661-202ENST00000547102 NSMFQ6X4W1 530 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 ZSCAN10Q96SZ4 725 aaPredicted RBP12.55□□□□□ -0.4
LINC00661-202ENST00000547102 ABHD16BQ9H3Z7 469 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 SPC25Q9HBM1 224 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 A1CFQ9NQ94 594 aaKnown RBP12.55□□□□□ -0.4
LINC00661-202ENST00000547102 ATP11BQ9Y2G3 1177 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 MCM3APO60318 1980 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
LINC00661-202ENST00000547102 SNHG28P0DPA3 235 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 CHMLP26374 656 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 ADCYAP1R1P41586 468 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 MAGEA10P43363 369 aaPredicted RBP12.54□□□□□ -0.4
LINC00661-202ENST00000547102 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 ACVR2BQ13705 512 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 FAM133AQ8N9E0 248 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 PNMA1Q8ND90 353 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 LENG1Q96BZ8 264 aaPredicted RBP12.54□□□□□ -0.4
LINC00661-202ENST00000547102 LBHD1Q9BQE6 289 aaPredicted RBP12.54□□□□□ -0.4
LINC00661-202ENST00000547102 PRO3102Q9H379 93 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 PHF24Q9UPV7 400 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
LINC00661-202ENST00000547102 TNKSO95271 1327 aa12.54□□□□□ -0.4
LINC00661-202ENST00000547102 PTPDC1A2A3K4 754 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 DUSP11O75319 330 aaKnown RBP12.53□□□□□ -0.4
LINC00661-202ENST00000547102 BMP8BP34820 402 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 ASPRV1Q53RT3 343 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 SLC39A5Q6ZMH5 540 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
LINC00661-202ENST00000547102 FERMT2Q96AC1 680 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 FGD4Q96M96 766 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 GDF15Q99988 308 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
LINC00661-202ENST00000547102 IL25Q9H293 177 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 CYP39A1Q9NYL5 469 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 ADD3Q9UEY8 706 aaKnown RBP12.53□□□□□ -0.4
LINC00661-202ENST00000547102 SYNRGQ9UMZ2 1314 aa12.53□□□□□ -0.4
LINC00661-202ENST00000547102 A0A1W2PQ45 241 aaPredicted RBP12.52□□□□□ -0.41
LINC00661-202ENST00000547102 A0A1W2PQY0 241 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms