RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 GPATCH4Q5T3I0 446 aaKnown RBP17.34■□□□□ 0.37
CCDC38-205ENST00000546947 SYDE2Q5VT97 1194 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 FRMPD2Q68DX3 1309 aaPredicted RBP17.34■□□□□ 0.37
CCDC38-205ENST00000546947 TTBK2Q6IQ55 1244 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 NECAB2Q7Z6G3 386 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 MSL3Q8N5Y2 521 aaKnown RBP17.34■□□□□ 0.37
CCDC38-205ENST00000546947 PNMA1Q8ND90 353 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 TRPV1Q8NER1 839 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 PAWRQ96IZ0 340 aaKnown RBP17.34■□□□□ 0.37
CCDC38-205ENST00000546947 UBAC1Q9BSL1 405 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 RANBP17Q9H2T7 1088 aaKnown RBP17.34■□□□□ 0.37
CCDC38-205ENST00000546947 ACAD9Q9H845 621 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 KAT14Q9H8E8 782 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 DDX20Q9UHI6 824 aaKnown RBP17.34■□□□□ 0.37
CCDC38-205ENST00000546947 NRBP1Q9UHY1 535 aa17.34■□□□□ 0.37
CCDC38-205ENST00000546947 CCDC174Q6PII3 467 aa17.33■□□□□ 0.36
CCDC38-205ENST00000546947 KIAA1211Q6ZU35 1233 aa17.33■□□□□ 0.36
CCDC38-205ENST00000546947 ANKRD35Q8N283 1001 aa17.33■□□□□ 0.36
CCDC38-205ENST00000546947 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
CCDC38-205ENST00000546947 AGBL1Q96MI9 1066 aa17.33■□□□□ 0.36
CCDC38-205ENST00000546947 TINF2Q9BSI4 451 aa17.33■□□□□ 0.36
CCDC38-205ENST00000546947 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.36
CCDC38-205ENST00000546947 GPCPD1Q9NPB8 672 aa17.33■□□□□ 0.36
CCDC38-205ENST00000546947 SMCHD1A6NHR9 2005 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 ALPK3Q96L96 1907 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 SEPT4O43236 478 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 SLC16A2P36021 539 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 MNX1P50219 401 aaPredicted RBP17.32■□□□□ 0.36
CCDC38-205ENST00000546947 ZNF467Q7Z7K2 595 aaPredicted RBP17.32■□□□□ 0.36
CCDC38-205ENST00000546947 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 DIS3LQ8TF46 1054 aaKnown RBP17.32■□□□□ 0.36
CCDC38-205ENST00000546947 DPF3Q92784 378 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 TRERF1Q96PN7 1200 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 HOMER2Q9NSB8 354 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 RNF146Q9NTX7 359 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 PNMA2Q9UL42 364 aa17.32■□□□□ 0.36
CCDC38-205ENST00000546947 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
CCDC38-205ENST00000546947 SYNGAP1Q96PV0 1343 aa17.31■□□□□ 0.36
CCDC38-205ENST00000546947 ICAM1P05362 532 aa17.31■□□□□ 0.36
CCDC38-205ENST00000546947 ALAS1P13196 640 aa17.31■□□□□ 0.36
CCDC38-205ENST00000546947 SNAP25P60880 206 aa17.31■□□□□ 0.36
CCDC38-205ENST00000546947 IFIT1BQ5T764 474 aaKnown RBP17.31■□□□□ 0.36
CCDC38-205ENST00000546947 CYB5R4Q7L1T6 521 aa17.31■□□□□ 0.36
CCDC38-205ENST00000546947 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
CCDC38-205ENST00000546947 NCOA7Q8NI08 942 aa17.31■□□□□ 0.36
CCDC38-205ENST00000546947 CCPG1Q9ULG6 757 aa17.31■□□□□ 0.36
CCDC38-205ENST00000546947 PFASO15067 1338 aa17.3■□□□□ 0.36
CCDC38-205ENST00000546947 MYH6P13533 1939 aa17.3■□□□□ 0.36
CCDC38-205ENST00000546947 E7EWF7 191 aa17.3■□□□□ 0.36
CCDC38-205ENST00000546947 SEC23AQ15436 765 aa17.3■□□□□ 0.36
CCDC38-205ENST00000546947 ASPRV1Q53RT3 343 aa17.3■□□□□ 0.36
CCDC38-205ENST00000546947 PRAMEF19Q5SWL8 479 aa17.3■□□□□ 0.36
CCDC38-205ENST00000546947 MAMDC4Q6UXC1 1216 aa17.3■□□□□ 0.36
CCDC38-205ENST00000546947 LSG1Q9H089 658 aaKnown RBP17.3■□□□□ 0.36
CCDC38-205ENST00000546947 C11orf49Q9H6J7 331 aa17.3■□□□□ 0.36
CCDC38-205ENST00000546947 A1CFQ9NQ94 594 aaKnown RBP17.3■□□□□ 0.36
CCDC38-205ENST00000546947 MCM3APO60318 1980 aa17.29■□□□□ 0.36
CCDC38-205ENST00000546947 ERICH2A1L162 156 aa17.29■□□□□ 0.36
CCDC38-205ENST00000546947 CASC1Q6TDU7 716 aa17.29■□□□□ 0.36
CCDC38-205ENST00000546947 CNPY2Q9Y2B0 182 aa17.29■□□□□ 0.36
CCDC38-205ENST00000546947 WDR19Q8NEZ3 1342 aa17.28■□□□□ 0.36
CCDC38-205ENST00000546947 LCTP09848 1927 aa17.28■□□□□ 0.36
CCDC38-205ENST00000546947 POTEB2H3BUK9 544 aa17.28■□□□□ 0.36
CCDC38-205ENST00000546947 GOLGA8HP0CJ92 632 aa17.28■□□□□ 0.36
CCDC38-205ENST00000546947 SART3Q15020 963 aaKnown RBP17.28■□□□□ 0.36
CCDC38-205ENST00000546947 MUM1L1Q5H9M0 696 aa17.28■□□□□ 0.36
CCDC38-205ENST00000546947 FAM133AQ8N9E0 248 aa17.28■□□□□ 0.36
CCDC38-205ENST00000546947 DNM1LO00429 736 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.36
CCDC38-205ENST00000546947 CDC45O75419 566 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 SNAI1O95863 264 aaPredicted RBP17.27■□□□□ 0.36
CCDC38-205ENST00000546947 PARP1P09874 1014 aaKnown RBP17.27■□□□□ 0.36
CCDC38-205ENST00000546947 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.36
CCDC38-205ENST00000546947 COL6A1P12109 1028 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 AKR1A1P14550 325 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 ARRDC4Q8NCT1 418 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 FGD4Q96M96 766 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 UBA5Q9GZZ9 404 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 ANO2Q9NQ90 1003 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 CYP39A1Q9NYL5 469 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 NR2E3Q9Y5X4 410 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 TAF6LQ9Y6J9 622 aa17.27■□□□□ 0.36
CCDC38-205ENST00000546947 DNAH12Q6ZR08 3092 aa17.26■□□□□ 0.35
CCDC38-205ENST00000546947 EVI5O60447 810 aa17.26■□□□□ 0.35
CCDC38-205ENST00000546947 TAL1P17542 331 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-205ENST00000546947 WTAPQ15007 396 aa17.26■□□□□ 0.35
CCDC38-205ENST00000546947 NECTIN1Q15223 517 aa17.26■□□□□ 0.35
CCDC38-205ENST00000546947 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
CCDC38-205ENST00000546947 ANO1Q5XXA6 986 aa17.26■□□□□ 0.35
CCDC38-205ENST00000546947 MB21D2Q8IYB1 491 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-205ENST00000546947 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-205ENST00000546947 ASB14A6NK59 587 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
CCDC38-205ENST00000546947 RARBP10826 455 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 CNTN2Q02246 1040 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 CREB3L3Q68CJ9 461 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 NSMFQ6X4W1 530 aa17.25■□□□□ 0.35
CCDC38-205ENST00000546947 ARMCX2Q7L311 632 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms