RNA–Protein interactions for RNA: ENST00000546293.1

ARAP1-221, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 3

Gene ARAP1, Length 702 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-221ENST00000546293 ICAM1P05362 532 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 MAPK4P31152 587 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 COPB2P35606 906 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 PSMC4P43686 418 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
ARAP1-221ENST00000546293 SNAP25P60880 206 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 PLS1Q14651 629 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 ARHGEF6Q15052 776 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 SRBD1Q8N5C6 995 aaKnown RBP20.53■□□□□ 0.88
ARAP1-221ENST00000546293 ARHGAP39Q9C0H5 1083 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 PNMA2Q9UL42 364 aa20.53■□□□□ 0.88
ARAP1-221ENST00000546293 CCDC196A0A1B0GTZ2 297 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 GNRH1P01148 92 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 CDC27P30260 824 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 FCGRTP55899 365 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 SNRNP48Q6IEG0 339 aaKnown RBP20.52■□□□□ 0.88
ARAP1-221ENST00000546293 CPXCR1Q8N123 301 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 TRIM47Q96LD4 638 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 MROH8Q9H579 483 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 EFCC1Q9HA90 598 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 VAT1LQ9HCJ6 419 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 TPCN1Q9ULQ1 816 aa20.52■□□□□ 0.88
ARAP1-221ENST00000546293 NAP1L2Q9ULW6 460 aaPredicted RBP20.52■□□□□ 0.88
ARAP1-221ENST00000546293 COL11A1P12107 1806 aaPredicted RBP20.51■□□□□ 0.87
ARAP1-221ENST00000546293 ERCC3P19447 782 aa20.51■□□□□ 0.87
ARAP1-221ENST00000546293 FUT2Q10981 343 aa20.51■□□□□ 0.87
ARAP1-221ENST00000546293 CDC37Q16543 378 aaPredicted RBP20.51■□□□□ 0.87
ARAP1-221ENST00000546293 TKFCQ3LXA3 575 aa20.51■□□□□ 0.87
ARAP1-221ENST00000546293 CCDC174Q6PII3 467 aa20.51■□□□□ 0.87
ARAP1-221ENST00000546293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.51■□□□□ 0.87
ARAP1-221ENST00000546293 AGBL1Q96MI9 1066 aa20.51■□□□□ 0.87
ARAP1-221ENST00000546293 LARP6Q9BRS8 491 aaKnown RBP20.51■□□□□ 0.87
ARAP1-221ENST00000546293 RIPK3Q9Y572 518 aa20.51■□□□□ 0.87
ARAP1-221ENST00000546293 ZBTB5O15062 677 aa20.5■□□□□ 0.87
ARAP1-221ENST00000546293 DHX16O60231 1041 aaKnown RBP20.5■□□□□ 0.87
ARAP1-221ENST00000546293 FMNL1O95466 1100 aaPredicted RBP20.5■□□□□ 0.87
ARAP1-221ENST00000546293 ADD1P35611 737 aaKnown RBP20.5■□□□□ 0.87
ARAP1-221ENST00000546293 QRICH1Q2TAL8 776 aa20.5■□□□□ 0.87
ARAP1-221ENST00000546293 PLEKHH3Q7Z736 793 aa20.5■□□□□ 0.87
ARAP1-221ENST00000546293 CASP8AP2Q9UKL3 1982 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 TNPO2O14787 897 aaKnown RBP20.49■□□□□ 0.87
ARAP1-221ENST00000546293 PFKFB2O60825 505 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 NTRK3Q16288 839 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 GPR142Q7Z601 462 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 NCAPG2Q86XI2 1143 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 CCAR1Q8IX12 1150 aaKnown RBP20.49■□□□□ 0.87
ARAP1-221ENST00000546293 CMTR1Q8N1G2 835 aaKnown RBP20.49■□□□□ 0.87
ARAP1-221ENST00000546293 CHST13Q8NET6 341 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 PIGSQ96S52 555 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 CCPG1Q9ULG6 757 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 CNTNAP5Q8WYK1 1306 aa20.49■□□□□ 0.87
ARAP1-221ENST00000546293 PNMA6FA0A0J9YX94 578 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 STRNO43815 780 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 PTPREP23469 700 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 HOXD10P28358 340 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 CCT2P78371 535 aaKnown RBP20.48■□□□□ 0.87
ARAP1-221ENST00000546293 OTOP1Q7RTM1 612 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 ABRAQ8N0Z2 381 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 COA7Q96BR5 231 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 FBXO40Q9UH90 709 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 GJD2Q9UKL4 321 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 LIMCH1Q9UPQ0 1083 aa20.48■□□□□ 0.87
ARAP1-221ENST00000546293 SLC15A5A6NIM6 579 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 ST18O60284 1047 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 PRMT2P55345 433 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 ME3Q16798 604 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 MORN1Q5T089 497 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 CTU1Q7Z7A3 348 aaKnown RBP20.47■□□□□ 0.87
ARAP1-221ENST00000546293 FBXO11Q86XK2 927 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 USP6NLQ92738 828 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 RRP36Q96EU6 259 aaKnown RBP20.47■□□□□ 0.87
ARAP1-221ENST00000546293 TRERF1Q96PN7 1200 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 AMNQ9BXJ7 453 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 SLKQ9H2G2 1235 aaPredicted RBP20.47■□□□□ 0.87
ARAP1-221ENST00000546293 NCOA5Q9HCD5 579 aaKnown RBP20.47■□□□□ 0.87
ARAP1-221ENST00000546293 RNF146Q9NTX7 359 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 SRRDQ9UH36 339 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 TRIM17Q9Y577 477 aa20.47■□□□□ 0.87
ARAP1-221ENST00000546293 MGAMO43451 1857 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 PPP1R11O60927 126 aaPredicted RBP20.46■□□□□ 0.87
ARAP1-221ENST00000546293 ALAS1P13196 640 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 IFNAR1P17181 557 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 SCRN1Q12765 414 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 TRAF1Q13077 416 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 GRB14Q14449 540 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 HOMER1Q86YM7 354 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 CCDC82Q8N4S0 544 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 ACAD9Q9H845 621 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 BAZ2BQ9UIF8 2168 aaKnown RBP20.46■□□□□ 0.87
ARAP1-221ENST00000546293 ABCB11O95342 1321 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 ZSWIM8A7E2V4 1837 aa20.46■□□□□ 0.87
ARAP1-221ENST00000546293 ECM2O94769 699 aaPredicted RBP20.45■□□□□ 0.86
ARAP1-221ENST00000546293 LARGE1O95461 756 aa20.45■□□□□ 0.86
ARAP1-221ENST00000546293 STK3Q13188 491 aa20.45■□□□□ 0.86
ARAP1-221ENST00000546293 WDR78Q5VTH9 848 aa20.45■□□□□ 0.86
ARAP1-221ENST00000546293 NOL8Q76FK4 1167 aaKnown RBP20.45■□□□□ 0.86
ARAP1-221ENST00000546293 SOCS4Q8WXH5 440 aa20.45■□□□□ 0.86
ARAP1-221ENST00000546293 CLEC4DQ8WXI8 215 aa20.45■□□□□ 0.86
ARAP1-221ENST00000546293 ZSCAN31Q96LW9 406 aaPredicted RBP20.45■□□□□ 0.86
ARAP1-221ENST00000546293 MAF1Q9H063 256 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms