RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	GATA6	Q92908	595 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	SGSM3	Q96HU1	749 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	ACSS3	Q9H6R3	686 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	PIDD1	Q9HB75	910 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	RC3H2	Q9HBD1	1191 aa	Known RBP	4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	LGR6	Q9HBX8	967 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	CBX8	Q9HC52	389 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	FAM105A	Q9NUU6	356 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	SAMM50	Q9Y512	469 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	RNF17	Q9BXT8	1623 aa	Known RBP	4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	RICTOR	Q6R327	1708 aa		4.63	□□□□□ -1.67
CUL3-215	ENST00000546102	MLH3	Q9UHC1	1453 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102		A0A1W2PQH9	124 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	PAPLN	O95428	1278 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	NME2	P22392	152 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	MRM1	Q6IN84	353 aa	Known RBP	4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	ZNF574	Q6ZN55	896 aa	Predicted RBP	4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	ATG4D	Q86TL0	474 aa	Predicted RBP	4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	ZSWIM2	Q8NEG5	633 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	GRIN3A	Q8TCU5	1115 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	NETO1	Q8TDF5	533 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	STK35	Q8TDR2	534 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	FAM168A	Q92567	244 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	GAL3ST3	Q96A11	431 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	CCDC136	Q96JN2	1154 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	ANTXR1	Q9H6X2	564 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	CYP8B1	Q9UNU6	501 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	PLAA	Q9Y263	795 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	ATP8A1	Q9Y2Q0	1164 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	THRAP3	Q9Y2W1	955 aa	Known RBP	4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	BCORL1	Q5H9F3	1711 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	KIDINS220	Q9ULH0	1771 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	KIF13A	Q9H1H9	1805 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	NUP155	O75694	1391 aa		4.62	□□□□□ -1.67
CUL3-215	ENST00000546102	FRMPD1	Q5SYB0	1578 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	DIP2C	Q9Y2E4	1556 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	ABCA6	Q8N139	1617 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	ZC3H13	Q5T200	1668 aa	Known RBP	4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	PPRC1	Q5VV67	1664 aa	Known RBP	4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	IRS4	O14654	1257 aa	Predicted RBP	4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	AOC2	O75106	756 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	FAM153B	P0C7A2	387 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	SLFN14	P0C7P3	912 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	MYCLP1	P12525	358 aa	Predicted RBP	4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	TBX4	P57082	545 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	AP3B2	Q13367	1082 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	LRRC14	Q15048	493 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	BRDT	Q58F21	947 aa	Predicted RBP	4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	LLGL2	Q6P1M3	1020 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	TTC6	Q86TZ1	520 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	SULF2	Q8IWU5	870 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	RAVER1	Q8IY67	606 aa	Known RBP	4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	SYNPO	Q8N3V7	929 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	PI4K2B	Q8TCG2	481 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	MORC4	Q8TE76	937 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	CHAC2	Q8WUX2	184 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	MPHOSPH9	Q99550	1183 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	NRSN2	Q9GZP1	204 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	EHMT1	Q9H9B1	1298 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	TCEAL9	Q9UHQ7	104 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	EID1	Q9Y6B2	187 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	KANK1	Q14678	1352 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	A2M	P01023	1474 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	RPRD2	Q5VT52	1461 aa	Known RBP	4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	TET3	O43151	1660 aa		4.61	□□□□□ -1.67
CUL3-215	ENST00000546102	TSPOAP1	O95153	1857 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	UPK3BL1	B0FP48	263 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	UPK3BL2	E5RIL1	263 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	KCNQ2	O43526	872 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	PRC1	O43663	620 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	POU3F3	P20264	500 aa	Predicted RBP	4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	RPL6	Q02878	288 aa	Known RBP	4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	PTPN11	Q06124	597 aa	Predicted RBP	4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	ZNF124	Q15973	351 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	ZNF423	Q2M1K9	1284 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	TM4SF20	Q53R12	229 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	TMEM67	Q5HYA8	995 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	THNSL2	Q86YJ6	484 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	CCAR1	Q8IX12	1150 aa	Known RBP	4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	NIM1K	Q8IY84	436 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	C19orf47	Q8N9M1	422 aa	Known RBP	4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	TMEM40	Q8WWA1	233 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	PMM1	Q92871	262 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	NINJ1	Q92982	152 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	MFSD3	Q96ES6	412 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	ATXN3L	Q9H3M9	355 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	C1GALT1	Q9NS00	363 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	VAV3	Q9UKW4	847 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	DHX29	Q7Z478	1369 aa	Known RBP	4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	EFCAB6	Q5THR3	1501 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	ARHGEF40	Q8TER5	1519 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	VWDE	Q8N2E2	1590 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	RERE	Q9P2R6	1566 aa		4.6	□□□□□ -1.67
CUL3-215	ENST00000546102	CCDC144A	A2RUR9	1427 aa		4.59	□□□□□ -1.67
CUL3-215	ENST00000546102	TRPM2	O94759	1503 aa		4.59	□□□□□ -1.67

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