RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 KRT19P08727 400 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 PKP1Q13835 747 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 NECTIN1Q15223 517 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 ABCB5Q2M3G0 1257 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 TMEM87BQ96K49 555 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 PNMA3Q9UL41 463 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 XIRP1Q702N8 1843 aaKnown RBP9.57□□□□□ -0.88
CLIP1-218ENST00000545889 TXKP42681 527 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 SNX16P57768 344 aa9.57□□□□□ -0.88
CLIP1-218ENST00000545889 USP14P54578 494 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 SV2BQ7L1I2 683 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 IQUBQ8NA54 791 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 TDRD3Q9H7E2 651 aaKnown RBP9.56□□□□□ -0.88
CLIP1-218ENST00000545889 RTEL1Q9NZ71 1219 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 SCAF8Q9UPN6 1271 aaKnown RBP9.56□□□□□ -0.88
CLIP1-218ENST00000545889 ZNF609O15014 1411 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 FAM196BA6NMK8 535 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 CD19P15391 556 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 SYT1P21579 422 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 ADD1P35611 737 aaKnown RBP9.56□□□□□ -0.88
CLIP1-218ENST00000545889 SLC20A2Q08357 652 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 CFAP58Q5T655 872 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 GIMAP6Q6P9H5 292 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 OTUD6AQ7L8S5 288 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 PODNQ7Z5L7 613 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 MCF2L2Q86YR7 1114 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 GPT2Q8TD30 523 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 CRACR2AQ9BSW2 395 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 NAA15Q9BXJ9 866 aaKnown RBP9.56□□□□□ -0.88
CLIP1-218ENST00000545889 TM6SF1Q9BZW5 370 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 ARPP21Q9UBL0 812 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-218ENST00000545889 NUB1Q9Y5A7 615 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.56□□□□□ -0.881e-6■■■■□ 19.9
CLIP1-218ENST00000545889 ANKRD65E5RJM6 399 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 EIF3JO75822 258 aaKnown RBP9.56□□□□□ -0.88
CLIP1-218ENST00000545889 CCDC183Q5T5S1 534 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 FBXO33Q7Z6M2 555 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 PPP1R14CQ8TAE6 165 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 DEPTORQ8TB45 409 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 YY1AP1Q9H869 796 aa9.56□□□□□ -0.88
CLIP1-218ENST00000545889 ADD3Q9UEY8 706 aaKnown RBP9.56□□□□□ -0.88
CLIP1-218ENST00000545889 GAS7O60861 476 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 TM4SF1P30408 202 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 IGBP1P78318 339 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 NONOQ15233 471 aaKnown RBP eCLIP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 DCAF17Q5H9S7 520 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 ZBTB8OSQ8IWT0 167 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 SLC44A5Q8NCS7 719 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 LZTS2Q9BRK4 669 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 RIOK1Q9BRS2 568 aaKnown RBP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 MTFR1LQ9H019 292 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 ZNF215Q9UL58 517 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 KCPQ6ZWJ8 1503 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 TNKSO95271 1327 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 DAPK3O43293 454 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 SLU7O95391 586 aaKnown RBP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 ELMSAN1Q6PJG2 1045 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 SLC51AQ86UW1 340 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 UIMC1Q96RL1 719 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 RPS6KC1Q96S38 1066 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 ATP8A2Q9NTI2 1148 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 TAF6LQ9Y6J9 622 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 FAM208AQ9UK61 1670 aaKnown RBP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 POTEB2H3BUK9 544 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 TRAF5O00463 557 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 ZSCAN22P10073 491 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 KRT5P13647 590 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 ZNF174Q15697 407 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 CDC37L1Q7L3B6 337 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 CCDC125Q86Z20 511 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 COA7Q96BR5 231 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 CCDC17Q96LX7 622 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 CCPG1Q9ULG6 757 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 SALL3Q9BXA9 1300 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 GOLGA6L10A0A0M3HER8 536 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 FGFR2P21802 821 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 UVSSAQ2YD98 709 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 TBC1D10BQ4KMP7 808 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 SLFN13Q68D06 897 aa9.55□□□□□ -0.88
CLIP1-218ENST00000545889 NSUN4Q96CB9 384 aaKnown RBP9.55□□□□□ -0.88
CLIP1-218ENST00000545889 VWA3AA6NCI4 1184 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 TMEM232C9JQI7 657 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 SPTLC2O15270 562 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 SORBS3O60504 671 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 CRKP46108 304 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 DNM1Q05193 864 aaKnown RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 CAMKK2Q96RR4 588 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 DNM3Q9UQ16 869 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 RRP15Q9Y3B9 282 aaKnown RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 BICDL2A1A5D9 508 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 CCNT1O60563 726 aaKnown RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 LARGE1O95461 756 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 PRPHP41219 470 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 ZNF165P49910 485 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 RNASELQ05823 741 aaKnown RBP9.54□□□□□ -0.88
CLIP1-218ENST00000545889 HSP90AA4PQ58FG1 418 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 MIGA2Q7L4E1 593 aa9.54□□□□□ -0.88
CLIP1-218ENST00000545889 LRRC47Q8N1G4 583 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms