RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 GIPRP48546 466 aa8.01□□□□□ -1.13
SNHG1-224ENST00000545688 DLG4P78352 724 aa8.01□□□□□ -1.13
SNHG1-224ENST00000545688 NOL9Q5SY16 702 aaKnown RBP8.01□□□□□ -1.13
SNHG1-224ENST00000545688 CWF19L1Q69YN2 538 aaKnown RBP8.01□□□□□ -1.13
SNHG1-224ENST00000545688 GALNT18Q6P9A2 607 aa8.01□□□□□ -1.13
SNHG1-224ENST00000545688 TMEM52Q8NDY8 209 aa8.01□□□□□ -1.13
SNHG1-224ENST00000545688 ZSCAN18Q8TBC5 510 aaPredicted RBP8.01□□□□□ -1.13
SNHG1-224ENST00000545688 SRRTQ9BXP5 876 aaKnown RBP8.01□□□□□ -1.13
SNHG1-224ENST00000545688 FHOD1Q9Y613 1164 aa8.01□□□□□ -1.13
SNHG1-224ENST00000545688 TEX51A0A1B0GUA7 166 aa8□□□□□ -1.13
SNHG1-224ENST00000545688 WTIPA6NIX2 430 aaPredicted RBP8□□□□□ -1.13
SNHG1-224ENST00000545688 GSTM1P09488 218 aa8□□□□□ -1.13
SNHG1-224ENST00000545688 NASPP49321 788 aaPredicted RBP8□□□□□ -1.13
SNHG1-224ENST00000545688 KRTAP19-4Q3LI73 84 aa8□□□□□ -1.13
SNHG1-224ENST00000545688 TMEM132EQ6IEE7 984 aa8□□□□□ -1.13
SNHG1-224ENST00000545688 LCNL1Q6ZST4 164 aa8□□□□□ -1.13
SNHG1-224ENST00000545688 FIBCD1Q8N539 461 aa8□□□□□ -1.13
SNHG1-224ENST00000545688 SGPP1Q9BX95 441 aa8□□□□□ -1.13
SNHG1-224ENST00000545688 GCM1Q9NP62 436 aa8□□□□□ -1.13
SNHG1-224ENST00000545688 CBFA2T2O43439 604 aa7.99□□□□□ -1.13
SNHG1-224ENST00000545688 ITGA4P13612 1032 aa7.99□□□□□ -1.13
SNHG1-224ENST00000545688 LINC00310P59036 64 aa7.99□□□□□ -1.13
SNHG1-224ENST00000545688 GNPTABQ3T906 1256 aa7.99□□□□□ -1.13
SNHG1-224ENST00000545688 FBLN7Q53RD9 439 aa7.99□□□□□ -1.13
SNHG1-224ENST00000545688 C19orf47Q8N9M1 422 aaKnown RBP7.99□□□□□ -1.13
SNHG1-224ENST00000545688 JMJD8Q96S16 334 aa7.99□□□□□ -1.13
SNHG1-224ENST00000545688 ACBD3Q9H3P7 528 aa7.99□□□□□ -1.13
SNHG1-224ENST00000545688 NOL6Q9H6R4 1146 aaKnown RBP7.99□□□□□ -1.13
SNHG1-224ENST00000545688 PCDHB10Q9UN67 800 aa7.99□□□□□ -1.13
SNHG1-224ENST00000545688 A0A1W2PQ45 241 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-224ENST00000545688 A0A1W2PQH9 124 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 A0A1W2PQY0 241 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 PRKCAP17252 672 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 NAT16Q8N8M0 369 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 OR6P1Q8NGX9 317 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 SHDQ96IW2 340 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 ZDHHC15Q96MV8 337 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 HAUS7Q99871 368 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 TGIF2Q9GZN2 237 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 IMPACTQ9P2X3 320 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 SLC12A7Q9Y666 1083 aa7.98□□□□□ -1.13
SNHG1-224ENST00000545688 ZSCAN22P10073 491 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-224ENST00000545688 ERVFRD-1P60508 538 aa7.97□□□□□ -1.13
SNHG1-224ENST00000545688 SRSF3P84103 164 aaKnown RBP7.97□□□□□ -1.13
SNHG1-224ENST00000545688 TCEAL1Q15170 157 aa7.97□□□□□ -1.13
SNHG1-224ENST00000545688 CIAPIN1Q6FI81 312 aa7.97□□□□□ -1.13
SNHG1-224ENST00000545688 NUP43Q8NFH3 380 aa7.97□□□□□ -1.13
SNHG1-224ENST00000545688 ADCY4Q8NFM4 1077 aa7.97□□□□□ -1.13
SNHG1-224ENST00000545688 PHAXQ9H814 394 aaKnown RBP7.97□□□□□ -1.13
SNHG1-224ENST00000545688 ACSL6Q9UKU0 697 aa7.97□□□□□ -1.13
SNHG1-224ENST00000545688 SF3B6Q9Y3B4 125 aaKnown RBP7.97□□□□□ -1.13
SNHG1-224ENST00000545688 FGF10O15520 208 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-224ENST00000545688 CD3EP07766 207 aa7.96□□□□□ -1.14
SNHG1-224ENST00000545688 IFNGR1P15260 489 aa7.96□□□□□ -1.14
SNHG1-224ENST00000545688 VIPR1P32241 457 aa7.96□□□□□ -1.14
SNHG1-224ENST00000545688 CYP4F8P98187 520 aa7.96□□□□□ -1.14
SNHG1-224ENST00000545688 LAPTM5Q13571 262 aa7.96□□□□□ -1.14
SNHG1-224ENST00000545688 PPP2R5DQ14738 602 aa7.96□□□□□ -1.14
SNHG1-224ENST00000545688 FCRL3Q96P31 734 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-224ENST00000545688 KLHL25Q9H0H3 589 aa7.96□□□□□ -1.14
SNHG1-224ENST00000545688 MBD1Q9UIS9 605 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-224ENST00000545688 A0A087WZG4 1122 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 HRKO00198 91 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 NUAK1O60285 661 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 ARL4AP40617 200 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 NOP2P46087 812 aaKnown RBP7.95□□□□□ -1.14
SNHG1-224ENST00000545688 YBX1P67809 324 aaKnown RBP7.95□□□□□ -1.14
SNHG1-224ENST00000545688 SLC7A5Q01650 507 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 PPP2R5EQ16537 467 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 HEATR6Q6AI08 1181 aaKnown RBP7.95□□□□□ -1.14
SNHG1-224ENST00000545688 CPLX3Q8WVH0 158 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 KLHL6Q8WZ60 621 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 TNFRSF12AQ9NP84 129 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 WHRNQ9P202 907 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 INPP5FQ9Y2H2 1132 aa7.95□□□□□ -1.14
SNHG1-224ENST00000545688 MPOP05164 745 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 EPHX1P07099 455 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 MSL3P1P0C860 447 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 POU4F1Q01851 419 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 HLA-DQA1Q5Y7H0 255 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 SIAH1Q8IUQ4 282 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 FAM169BQ8N8A8 192 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 SEC16BQ96JE7 1060 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 FGD4Q96M96 766 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 CCSER2Q9H7U1 834 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 SIRT5Q9NXA8 310 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 KLHL14Q9P2G3 628 aa7.94□□□□□ -1.14
SNHG1-224ENST00000545688 NUDT19A8MXV4 375 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 MVKQ03426 396 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 SSPNQ14714 243 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 LCE4AQ5TA78 99 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 CYP2R1Q6VVX0 501 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 AMIGO3Q86WK7 504 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 JAMLQ86YT9 394 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 PTCHD1Q96NR3 888 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 MCMBPQ9BTE3 642 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 GBP3Q9H0R5 595 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 IRF2BPLQ9H1B7 796 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 CNTD2Q9H8S5 307 aa7.93□□□□□ -1.14
SNHG1-224ENST00000545688 CNOT6Q9ULM6 557 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms