RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ACAD9Q9H845 621 aa23.46■■□□□ 1.35
CHD4-213ENST00000545584 TCP11L1Q9NUJ3 509 aa23.46■■□□□ 1.35
CHD4-213ENST00000545584 PRKAG2Q9UGJ0 569 aa23.46■■□□□ 1.35
CHD4-213ENST00000545584 TOP1P11387 765 aaKnown RBP23.45■■□□□ 1.34
CHD4-213ENST00000545584 RTP1P59025 263 aa23.45■■□□□ 1.34
CHD4-213ENST00000545584 AKNAD1Q5T1N1 836 aa23.45■■□□□ 1.34
CHD4-213ENST00000545584 CWC27Q6UX04 472 aaKnown RBP23.45■■□□□ 1.34
CHD4-213ENST00000545584 UBE2OQ9C0C9 1292 aaKnown RBP23.45■■□□□ 1.34
CHD4-213ENST00000545584 ZHX1Q9UKY1 873 aaPredicted RBP23.45■■□□□ 1.34
CHD4-213ENST00000545584 FAM184BQ9ULE4 1060 aa23.45■■□□□ 1.34
CHD4-213ENST00000545584 SMCHD1A6NHR9 2005 aa23.45■■□□□ 1.34
CHD4-213ENST00000545584 ADCYAP1R1P41586 468 aa23.44■■□□□ 1.34
CHD4-213ENST00000545584 SLC39A5Q6ZMH5 540 aa23.44■■□□□ 1.34
CHD4-213ENST00000545584 AGBL1Q96MI9 1066 aa23.44■■□□□ 1.34
CHD4-213ENST00000545584 LBHD1Q9BQE6 289 aaPredicted RBP23.44■■□□□ 1.34
CHD4-213ENST00000545584 RNF146Q9NTX7 359 aa23.44■■□□□ 1.34
CHD4-213ENST00000545584 PRR12Q9ULL5 1215 aa23.44■■□□□ 1.34
CHD4-213ENST00000545584 ATP11BQ9Y2G3 1177 aa23.44■■□□□ 1.34
CHD4-213ENST00000545584 POTEB2H3BUK9 544 aa23.43■■□□□ 1.34
CHD4-213ENST00000545584 ZNF213O14771 459 aa23.43■■□□□ 1.34
CHD4-213ENST00000545584 SNAI1O95863 264 aaPredicted RBP23.43■■□□□ 1.34
CHD4-213ENST00000545584 PGK1P00558 417 aa23.43■■□□□ 1.34
CHD4-213ENST00000545584 ALAS1P13196 640 aa23.43■■□□□ 1.34
CHD4-213ENST00000545584 CCDC174Q6PII3 467 aa23.43■■□□□ 1.34
CHD4-213ENST00000545584 FERMT2Q96AC1 680 aa23.43■■□□□ 1.34
CHD4-213ENST00000545584 TMEM47Q9BQJ4 181 aa23.43■■□□□ 1.34
CHD4-213ENST00000545584 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.43■■□□□ 1.34
CHD4-213ENST00000545584 ZNF536O15090 1300 aa23.42■■□□□ 1.34
CHD4-213ENST00000545584 MDM2Q00987 491 aaPredicted RBP23.42■■□□□ 1.34
CHD4-213ENST00000545584 TDHQ8IZJ6 230 aa23.42■■□□□ 1.34
CHD4-213ENST00000545584 ESR2Q92731 530 aa23.42■■□□□ 1.34
CHD4-213ENST00000545584 TTC14Q96N46 770 aa23.42■■□□□ 1.34
CHD4-213ENST00000545584 TRERF1Q96PN7 1200 aa23.42■■□□□ 1.34
CHD4-213ENST00000545584 ABHD16BQ9H3Z7 469 aa23.42■■□□□ 1.34
CHD4-213ENST00000545584 PHF24Q9UPV7 400 aa23.42■■□□□ 1.34
CHD4-213ENST00000545584 NT5C2P49902 561 aa23.41■■□□□ 1.34
CHD4-213ENST00000545584 ACVR2BQ13705 512 aa23.41■■□□□ 1.34
CHD4-213ENST00000545584 RASGRP2Q7LDG7 609 aa23.41■■□□□ 1.34
CHD4-213ENST00000545584 TBC1D10CQ8IV04 446 aa23.41■■□□□ 1.34
CHD4-213ENST00000545584 CCPG1Q9ULG6 757 aa23.41■■□□□ 1.34
CHD4-213ENST00000545584 RANBP2P49792 3224 aaKnown RBP23.4■■□□□ 1.34
CHD4-213ENST00000545584 SNAP25P60880 206 aa23.4■■□□□ 1.34
CHD4-213ENST00000545584 ARMCX2Q7L311 632 aa23.4■■□□□ 1.34
CHD4-213ENST00000545584 A1CFQ9NQ94 594 aaKnown RBP23.4■■□□□ 1.34
CHD4-213ENST00000545584 SNX17Q15036 470 aa23.39■■□□□ 1.33
CHD4-213ENST00000545584 TRIM60Q495X7 471 aa23.39■■□□□ 1.33
CHD4-213ENST00000545584 SYDE2Q5VT97 1194 aa23.39■■□□□ 1.33
CHD4-213ENST00000545584 BTNL9Q6UXG8 535 aa23.39■■□□□ 1.33
CHD4-213ENST00000545584 FAM133AQ8N9E0 248 aa23.39■■□□□ 1.33
CHD4-213ENST00000545584 LENG1Q96BZ8 264 aaPredicted RBP23.39■■□□□ 1.33
CHD4-213ENST00000545584 TSEN34Q9BSV6 310 aaKnown RBP23.39■■□□□ 1.33
CHD4-213ENST00000545584 SPC25Q9HBM1 224 aa23.39■■□□□ 1.33
CHD4-213ENST00000545584 GPCPD1Q9NPB8 672 aa23.39■■□□□ 1.33
CHD4-213ENST00000545584 CTNNA3Q9UI47 895 aa23.39■■□□□ 1.33
CHD4-213ENST00000545584 FRMPD2Q68DX3 1309 aaPredicted RBP23.38■■□□□ 1.33
CHD4-213ENST00000545584 ASB14A6NK59 587 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 DUSP11O75319 330 aaKnown RBP23.38■■□□□ 1.33
CHD4-213ENST00000545584 ICAM1P05362 532 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 SLC16A2P36021 539 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 CNTN2Q02246 1040 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 CCDC178Q5BJE1 867 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 C1orf53Q5VUE5 145 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 TTBK2Q6IQ55 1244 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 CCDC144CPQ8IYA2 1237 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 FGD4Q96M96 766 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 DSCC1Q9BVC3 393 aa23.38■■□□□ 1.33
CHD4-213ENST00000545584 RANBP17Q9H2T7 1088 aaKnown RBP23.38■■□□□ 1.33
CHD4-213ENST00000545584 PRDM5Q9NQX1 630 aaPredicted RBP23.38■■□□□ 1.33
CHD4-213ENST00000545584 SYNRGQ9UMZ2 1314 aa23.37■■□□□ 1.33
CHD4-213ENST00000545584 SOX1O00570 391 aaPredicted RBP23.37■■□□□ 1.33
CHD4-213ENST00000545584 ADAMTS4O75173 837 aa23.37■■□□□ 1.33
CHD4-213ENST00000545584 PDHBP11177 359 aa23.37■■□□□ 1.33
CHD4-213ENST00000545584 IMMTQ16891 758 aaKnown RBP23.37■■□□□ 1.33
CHD4-213ENST00000545584 CCDC144BQ3MJ40 725 aa23.37■■□□□ 1.33
CHD4-213ENST00000545584 IQCA1Q86XH1 822 aa23.37■■□□□ 1.33
CHD4-213ENST00000545584 PNMA2Q9UL42 364 aa23.37■■□□□ 1.33
CHD4-213ENST00000545584 NEDD4P46934 1319 aa23.36■■□□□ 1.33
CHD4-213ENST00000545584 A0A1W2PQ45 241 aaPredicted RBP23.36■■□□□ 1.33
CHD4-213ENST00000545584 A0A1W2PQY0 241 aa23.36■■□□□ 1.33
CHD4-213ENST00000545584 MOXD2PA6NHM9 499 aa23.36■■□□□ 1.33
CHD4-213ENST00000545584 LRIT3Q3SXY7 679 aa23.36■■□□□ 1.33
CHD4-213ENST00000545584 NSMFQ6X4W1 530 aa23.36■■□□□ 1.33
CHD4-213ENST00000545584 DGKHQ86XP1 1220 aa23.36■■□□□ 1.33
CHD4-213ENST00000545584 NUP133Q8WUM0 1156 aa23.36■■□□□ 1.33
CHD4-213ENST00000545584 LRCH3Q96II8 777 aa23.36■■□□□ 1.33
CHD4-213ENST00000545584 MCM3APO60318 1980 aa23.35■■□□□ 1.33
CHD4-213ENST00000545584 MUM1L1Q5H9M0 696 aa23.35■■□□□ 1.33
CHD4-213ENST00000545584 PCSK9Q8NBP7 692 aaKnown RBP23.35■■□□□ 1.33
CHD4-213ENST00000545584 ZKSCAN3Q9BRR0 538 aa23.35■■□□□ 1.33
CHD4-213ENST00000545584 CYP39A1Q9NYL5 469 aa23.35■■□□□ 1.33
CHD4-213ENST00000545584 SOWAHBA6NEL2 793 aa23.34■■□□□ 1.33
CHD4-213ENST00000545584 KDM4AO75164 1064 aa23.34■■□□□ 1.33
CHD4-213ENST00000545584 C6orf222P0C671 652 aaPredicted RBP23.34■■□□□ 1.33
CHD4-213ENST00000545584 ACLYP53396 1101 aa23.34■■□□□ 1.33
CHD4-213ENST00000545584 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
CHD4-213ENST00000545584 TLE2Q04725 743 aa23.34■■□□□ 1.33
CHD4-213ENST00000545584 ZNF543Q08ER8 600 aa23.34■■□□□ 1.33
CHD4-213ENST00000545584 TTC22Q5TAA0 569 aa23.34■■□□□ 1.33
CHD4-213ENST00000545584 KLHDC9Q8NEP7 349 aa23.34■■□□□ 1.33
CHD4-213ENST00000545584 STARD7Q9NQZ5 370 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms