RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 SNX17Q15036 470 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.19□□□□□ -0.94
LDHA-224ENST00000545467 BRAPQ7Z569 592 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 SPATA5Q8NB90 893 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 BICD2Q8TD16 824 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 USP6NLQ92738 828 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 TRIM43Q96BQ3 446 aaPredicted RBP9.19□□□□□ -0.94
LDHA-224ENST00000545467 LRRC2Q9BYS8 371 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 PUS7LQ9H0K6 701 aaKnown RBP9.19□□□□□ -0.94
LDHA-224ENST00000545467 PRDM12Q9H4Q4 367 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 C11orf16Q9NQ32 467 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 PIH1D3Q9NQM4 214 aaKnown RBP9.19□□□□□ -0.94
LDHA-224ENST00000545467 DDX20Q9UHI6 824 aaKnown RBP9.19□□□□□ -0.94
LDHA-224ENST00000545467 NOL7Q9UMY1 257 aaKnown RBP9.19□□□□□ -0.94
LDHA-224ENST00000545467 ZKSCAN5Q9Y2L8 839 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 ZNF532Q9HCE3 1301 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 STK36Q9NRP7 1315 aa9.19□□□□□ -0.94
LDHA-224ENST00000545467 KLF18A0A0U1RQI7 1052 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 SMIM22K7EJ46 135 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 CPLX1O14810 134 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 CTDNEP1O95476 244 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 YEATS4O95619 227 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 PTMAP06454 111 aaKnown RBP9.18□□□□□ -0.94
LDHA-224ENST00000545467 IGFBP4P22692 258 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 MAPK4P31152 587 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 RCAN1P53805 252 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 EPHB4P54760 987 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 MAP3K10Q02779 954 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 CHAF1AQ13111 956 aaPredicted RBP9.18□□□□□ -0.94
LDHA-224ENST00000545467 RASGRF1Q13972 1273 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 ADGRE1Q14246 886 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 C1orf53Q5VUE5 145 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 CCDC73Q6ZRK6 1079 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 SH3RF1Q7Z6J0 888 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 FBXO33Q7Z6M2 555 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 VPS37DQ86XT2 251 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 RNF214Q8ND24 703 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 FAM200AQ8TCP9 573 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 NACAP1Q9BZK3 213 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 ASCC2Q9H1I8 757 aaPredicted RBP9.18□□□□□ -0.94
LDHA-224ENST00000545467 TNMDQ9H2S6 317 aa9.18□□□□□ -0.94
LDHA-224ENST00000545467 GNL3LQ9NVN8 582 aaKnown RBP9.18□□□□□ -0.94
LDHA-224ENST00000545467 NAP1L2Q9ULW6 460 aaPredicted RBP9.18□□□□□ -0.94
LDHA-224ENST00000545467 RLFQ13129 1914 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 ATRNL1Q5VV63 1379 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 SH2B2O14492 632 aaPredicted RBP9.17□□□□□ -0.94
LDHA-224ENST00000545467 SEMA3EO15041 775 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 ZNF500O60304 480 aaPredicted RBP9.17□□□□□ -0.94
LDHA-224ENST00000545467 ANTXR2P58335 489 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 HAND2P61296 217 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 FOXK2Q01167 660 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 NFIAQ12857 509 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 CCL14Q16627 93 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 TRIM60Q495X7 471 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 SLFNL1Q499Z3 407 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 MFSD14CQ5VZR4 134 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 CDC42EP5Q6NZY7 148 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 PI16Q6UXB8 463 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 SGMS1Q86VZ5 419 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 ARRDC4Q8NCT1 418 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 DDX11Q96FC9 970 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 C8orf76Q96K31 380 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 STRBPQ96SI9 672 aaKnown RBP9.17□□□□□ -0.94
LDHA-224ENST00000545467 APBA2Q99767 749 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 KRT23Q9C075 422 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 NAPBQ9H115 298 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 RNF41Q9H4P4 317 aaPredicted RBP9.17□□□□□ -0.94
LDHA-224ENST00000545467 FAM198AQ9UFP1 575 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 USP25Q9UHP3 1055 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 RCOR1Q9UKL0 485 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 TACC3Q9Y6A5 838 aa9.17□□□□□ -0.94
LDHA-224ENST00000545467 FAM86C2PA6NEL3 165 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 GOLGA6L6A8MZA4 724 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 PATL2C9JE40 543 aaKnown RBP9.16□□□□□ -0.94
LDHA-224ENST00000545467 PI4K2BG5E9Z4 385 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 MBD4O95243 580 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 PCP11498 1178 aaKnown RBP9.16□□□□□ -0.94
LDHA-224ENST00000545467 LIG1P18858 919 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 LIFRP42702 1097 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 NT5C2P49902 561 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 METAP2P50579 478 aaKnown RBP eCLIP9.16□□□□□ -0.945e-10■■□□□ 11.5
LDHA-224ENST00000545467 CCT2P78371 535 aaKnown RBP9.16□□□□□ -0.94
LDHA-224ENST00000545467 NHLH1Q02575 133 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 TFF2Q03403 129 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 FPGSQ05932 587 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 TYRO3Q06418 890 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 SART3Q15020 963 aaKnown RBP9.16□□□□□ -0.94
LDHA-224ENST00000545467 MORN1Q5T089 497 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 TBC1D10CQ8IV04 446 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 KCNG4Q8TDN1 519 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 STAG1Q8WVM7 1258 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 WASF1Q92558 559 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 KCNH6Q9H252 994 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 DACT1Q9NYF0 836 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 ORC3Q9UBD5 711 aaPredicted RBP9.16□□□□□ -0.94
LDHA-224ENST00000545467 IQSEC3Q9UPP2 1182 aaPredicted RBP9.16□□□□□ -0.94
LDHA-224ENST00000545467 CDK5RAP2Q96SN8 1893 aa9.16□□□□□ -0.94
LDHA-224ENST00000545467 CHD9Q3L8U1 2897 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms