RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ST5P78524 1137 aa14.02□□□□□ -0.16
PAAF1-215ENST00000544909 NOM1Q5C9Z4 860 aaKnown RBP14.02□□□□□ -0.16
PAAF1-215ENST00000544909 TMCO3Q6UWJ1 677 aa14.02□□□□□ -0.16
PAAF1-215ENST00000544909 RPGRQ92834 1020 aaKnown RBP14.02□□□□□ -0.16
PAAF1-215ENST00000544909 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.16
PAAF1-215ENST00000544909 RBM17Q96I25 401 aaKnown RBP14.02□□□□□ -0.16
PAAF1-215ENST00000544909 NUP58Q9BVL2 599 aa14.02□□□□□ -0.16
PAAF1-215ENST00000544909 CD209Q9NNX6 404 aa14.02□□□□□ -0.16
PAAF1-215ENST00000544909 SEC63Q9UGP8 760 aaKnown RBP14.02□□□□□ -0.16
PAAF1-215ENST00000544909 GGA1Q9UJY5 639 aa14.02□□□□□ -0.16
PAAF1-215ENST00000544909 KLRG2A4D1S0 409 aaPredicted RBP14.01□□□□□ -0.17
PAAF1-215ENST00000544909 KLRF2D3W0D1 207 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 FANCGO15287 622 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 CDK8P49336 464 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 PPP2R3AQ06190 1150 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 LTBP1Q14766 1721 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 ASPRV1Q53RT3 343 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 FIGNQ5HY92 759 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 CNNM4Q6P4Q7 775 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 STAG2Q8N3U4 1231 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 TGFBRAP1Q8WUH2 860 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 GOLGA1Q92805 767 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 CRAMP1Q96RY5 1269 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 WDR24Q96S15 920 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 EYA3Q99504 573 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 STK17AQ9UEE5 414 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 FLT1P17948 1338 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 QSER1Q2KHR3 1735 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
PAAF1-215ENST00000544909 CASP14P31944 242 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 PRCPP42785 496 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 BTDP43251 543 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 DNM2P50570 870 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 CLCN6P51797 869 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 STX17P56962 302 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 PRR5LQ6MZQ0 368 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 TYW1BQ6NUM6 668 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 HEATR3Q7Z4Q2 680 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 NEK8Q86SG6 692 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 EHBP1Q8NDI1 1231 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 DNAJC7Q99615 494 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 C7orf25Q9BPX7 421 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 LRRC27Q9C0I9 530 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 RIOX1Q9H6W3 641 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 STX8Q9UNK0 236 aa14.01□□□□□ -0.17
PAAF1-215ENST00000544909 CCDC151A5D8V7 595 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 KLRC4O43908 158 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 HSP90AA4PQ58FG1 418 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 SLC27A3Q5K4L6 730 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 SOGA3Q5TF21 947 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 RAD9BQ6WBX8 426 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 ARHGAP27Q6ZUM4 889 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 GPKOWQ92917 476 aaPredicted RBP eCLIP14□□□□□ -0.17
PAAF1-215ENST00000544909 C8orf37Q96NL8 207 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 CARD6Q9BX69 1037 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 RAB34Q9BZG1 259 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 CDC23Q9UJX2 597 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 UBR3Q6ZT12 1888 aa14□□□□□ -0.17
PAAF1-215ENST00000544909 SOWAHDA6NJG2 315 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 SNHG28P0DPA3 235 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 FXR1P51114 621 aaKnown RBP eCLIP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 NAPAP54920 295 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 RHBDL3P58872 404 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 CDK17Q00537 523 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 EVX2Q03828 476 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 KARSQ15046 597 aaKnown RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 BRD3Q15059 726 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 WHAMMP3Q1A5X7 153 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 INF2Q27J81 1249 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 TTI2Q6NXR4 508 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 SRGAP1Q7Z6B7 1085 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 TEX11Q8IYF3 940 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 SMYD4Q8IYR2 804 aaPredicted RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 REXO1Q8N1G1 1221 aaKnown RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 OR8K1Q8NGG5 319 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 ZNF507Q8TCN5 953 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 HNRNPLLQ8WVV9 542 aaKnown RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 DYNLL2Q96FJ2 89 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 NAP1L4Q99733 375 aaKnown RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 GLT8D2Q9H1C3 349 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 BLZF1Q9H2G9 400 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 MAGEC2Q9UBF1 373 aaPredicted RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 SWAP70Q9UH65 585 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 MYH1P12882 1939 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 PVALEFA0A1B0GWK0 134 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 USP17L3A6NCW0 530 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 USP17L4A6NCW7 530 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 UFL1O94874 794 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 CCNE1P24864 410 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
PAAF1-215ENST00000544909 PIP4K2BP78356 416 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 GOLGA8FQ08AF8 430 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 GOLGA8DPQ0D2H9 430 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 PDIA5Q14554 519 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 DIXDC1Q155Q3 683 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 MEA1Q16626 185 aa13.99□□□□□ -0.17
PAAF1-215ENST00000544909 SLC35G1Q2M3R5 365 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms