RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.94■■□□□ 1.1
BPTF-208ENST00000544778 UHMK1Q8TAS1 419 aaKnown RBP21.94■■□□□ 1.1
BPTF-208ENST00000544778 PLEKHG3A1L390 1219 aa21.94■■□□□ 1.1
BPTF-208ENST00000544778 PLEKHM2Q8IWE5 1019 aa21.94■■□□□ 1.1
BPTF-208ENST00000544778 POLR2MP0CAP2 368 aa21.94■■□□□ 1.1
BPTF-208ENST00000544778 RFX6Q8HWS3 928 aa21.94■■□□□ 1.1
BPTF-208ENST00000544778 FAM227BQ96M60 508 aa21.94■■□□□ 1.1
BPTF-208ENST00000544778 ARHGAP6O43182 974 aa21.94■■□□□ 1.1
BPTF-208ENST00000544778 RSRC2Q7L4I2 434 aaKnown RBP21.94■■□□□ 1.1
BPTF-208ENST00000544778 CPSF3Q9UKF6 684 aaKnown RBP21.94■■□□□ 1.1
BPTF-208ENST00000544778 BFSP1Q12934 665 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 MORC4Q8TE76 937 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 PSTPIP2Q9H939 334 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 SETSIPP0DME0 302 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 SUFUQ9UMX1 484 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 PABPC4Q13310 644 aaKnown RBP eCLIP21.93■■□□□ 1.1
BPTF-208ENST00000544778 CFAP61Q8NHU2 1237 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 CDC26Q8NHZ8 85 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 CLCN1P35523 988 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 ADKP55263 362 aaKnown RBP21.93■■□□□ 1.1
BPTF-208ENST00000544778 ALKBH8Q96BT7 664 aaKnown RBP21.93■■□□□ 1.1
BPTF-208ENST00000544778 ZNF653Q96CK0 615 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 INTS4Q96HW7 963 aaKnown RBP21.93■■□□□ 1.1
BPTF-208ENST00000544778 METTL22Q9BUU2 404 aaPredicted RBP21.93■■□□□ 1.1
BPTF-208ENST00000544778 ATF2P15336 505 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 NOP14P78316 857 aaKnown RBP21.93■■□□□ 1.1
BPTF-208ENST00000544778 DPH5Q9H2P9 285 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 ABCC1P33527 1531 aa21.93■■□□□ 1.1
BPTF-208ENST00000544778 KIAA1841Q6NSI8 718 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 TSPYL6Q8N831 410 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 SEPT9Q9UHD8 586 aaPredicted RBP21.92■■□□□ 1.1
BPTF-208ENST00000544778 NFE2L3Q9Y4A8 694 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 LPIN2Q92539 896 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 CBX8Q9HC52 389 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 SCNN1DP51172 638 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 TNFAIP1Q13829 316 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 BRD3Q15059 726 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 LRRC47Q8N1G4 583 aaKnown RBP21.92■■□□□ 1.1
BPTF-208ENST00000544778 PPM1KQ8N3J5 372 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 TPX2Q9ULW0 747 aaKnown RBP21.92■■□□□ 1.1
BPTF-208ENST00000544778 PHLDB3Q6NSJ2 640 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 SULF1Q8IWU6 871 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 CCDC127Q96BQ5 260 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 DBNDD2Q9BQY9 259 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 DDX25Q9UHL0 483 aaKnown RBP21.92■■□□□ 1.1
BPTF-208ENST00000544778 PCF11O94913 1555 aaKnown RBP21.92■■□□□ 1.1
BPTF-208ENST00000544778 SYNJ1O43426 1573 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 PDCD2Q16342 344 aaPredicted RBP21.92■■□□□ 1.1
BPTF-208ENST00000544778 DOK7Q18PE1 504 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 METTL23Q86XA0 190 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 CDKL2Q92772 493 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 FAN1Q9Y2M0 1017 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 PCDHB4Q9Y5E5 795 aa21.92■■□□□ 1.1
BPTF-208ENST00000544778 SRGAP2BP0DMP2 458 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 ARMCX5Q6P1M9 558 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 USP26Q9BXU7 913 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 TYW1Q9NV66 732 aaKnown RBP21.91■■□□□ 1.1
BPTF-208ENST00000544778 PCDHA12Q9UN75 941 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 CCDC84Q86UT8 332 aaPredicted RBP21.91■■□□□ 1.1
BPTF-208ENST00000544778 BBS5Q8N3I7 341 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 YTHDC2Q9H6S0 1430 aaKnown RBP21.91■■□□□ 1.1
BPTF-208ENST00000544778 RNF8O76064 485 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 SUDS3Q9H7L9 328 aaPredicted RBP21.91■■□□□ 1.1
BPTF-208ENST00000544778 GPC4O75487 556 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 POLA2Q14181 598 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.91■■□□□ 1.1
BPTF-208ENST00000544778 ZNF148Q9UQR1 794 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 FLT4P35916 1363 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 POC1B-GALNT4F8VUJ3 575 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 FAM160B1Q5W0V3 765 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 IMPACTQ9P2X3 320 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 FANCAO15360 1455 aa21.91■■□□□ 1.1
BPTF-208ENST00000544778 GCP02774 474 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 OAS2P29728 719 aaKnown RBP21.9■■□□□ 1.1
BPTF-208ENST00000544778 ASPHQ12797 758 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 SUCLA2Q9P2R7 463 aaPredicted RBP21.9■■□□□ 1.1
BPTF-208ENST00000544778 MRPL11Q9Y3B7 192 aaKnown RBP21.9■■□□□ 1.1
BPTF-208ENST00000544778 KCNA4P22459 653 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 TEKT3Q9BXF9 490 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 MROH5Q6ZUA9 1318 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 YWHAGP61981 247 aaKnown RBP eCLIP21.9■■□□□ 1.1
BPTF-208ENST00000544778 SLFN12Q8IYM2 578 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 MYOCDQ8IZQ8 938 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 DCTPP1Q9H773 170 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 IFT122Q9HBG6 1241 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 DTNBO60941 627 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 MFSD14BQ5SR56 506 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 FAM178BQ8IXR5 827 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 MIS12Q9H081 205 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 RCN2Q14257 317 aa21.9■■□□□ 1.1
BPTF-208ENST00000544778 TBC1D10BQ4KMP7 808 aaPredicted RBP21.89■■□□□ 1.1
BPTF-208ENST00000544778 ZNF75DP51815 510 aa21.89■■□□□ 1.1
BPTF-208ENST00000544778 RSBN1LQ6PCB5 846 aaPredicted RBP21.89■■□□□ 1.1
BPTF-208ENST00000544778 PPWD1Q96BP3 646 aaKnown RBP21.89■■□□□ 1.1
BPTF-208ENST00000544778 KCNJ18B7U540 433 aa21.89■■□□□ 1.09
BPTF-208ENST00000544778 ATP1A2P50993 1020 aa21.89■■□□□ 1.09
BPTF-208ENST00000544778 KCNJ12Q14500 433 aa21.89■■□□□ 1.09
BPTF-208ENST00000544778 CERKLQ49MI3 558 aaPredicted RBP21.89■■□□□ 1.09
BPTF-208ENST00000544778 ACBD5Q5T8D3 534 aaPredicted RBP21.89■■□□□ 1.09
BPTF-208ENST00000544778 ZNF790Q6PG37 636 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms