RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CERS5Q8N5B7 392 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 TBCKQ8TEA7 893 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 A0A1B0GUL6 1792 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 A0A1B0GTH6 734 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 POTEMA6NI47 508 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 TDP2O95551 362 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 PARP1P09874 1014 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 ZNF446Q9NWS9 450 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 TTF2Q9UNY4 1162 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 LEMD3Q9Y2U8 911 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 LAMB2P55268 1798 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 WNK3Q9BYP7 1800 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 ARHGAP6O43182 974 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 TNNI2P48788 182 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 RHBDL3P58872 404 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 UBXN1Q04323 297 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 PAK1Q13153 545 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 PPP2R5BQ15173 497 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 DGKHQ86XP1 1220 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 KIAA0825Q8IV33 1275 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 SRRTQ9BXP5 876 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 DAGLAQ9Y4D2 1042 aa17.79■□□□□ 0.44
SNRNP70-203ENST00000544278 G3V3G9 751 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 SSBP05455 408 aaKnown RBP eCLIP17.78■□□□□ 0.442e-8■□□□□ 9.6
SNRNP70-203ENST00000544278 RBM5P52756 815 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 RCAN1P53805 252 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 DCAF8Q5TAQ9 597 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 KANSL2Q9H9L4 492 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 ST5P78524 1137 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 SLC30A10Q6XR72 485 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 FNBP4Q8N3X1 1017 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 GLIS3Q8NEA6 775 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 TRIM47Q96LD4 638 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 NUDT12Q9BQG2 462 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 MTA3Q9BTC8 594 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 SLC39A2Q9NP94 309 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 DISC1Q9NRI5 854 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 PARP3Q9Y6F1 533 aa17.78■□□□□ 0.44
SNRNP70-203ENST00000544278 KCNJ18B7U540 433 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 CASQ1P31415 396 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 KCNJ12Q14500 433 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 LRRC41Q15345 812 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 GSDMAQ96QA5 445 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 TBC1D7Q9P0N9 293 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 SCAF8Q9UPN6 1271 aaKnown RBP17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 IDEP14735 1019 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 HSPA1LP34931 641 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 ASIC1P78348 528 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 CCDC96Q2M329 555 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 UBXN4Q92575 508 aa17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 PCMTD1Q96MG8 357 aaPredicted RBP17.77■□□□□ 0.44
SNRNP70-203ENST00000544278 TXLNAP40222 546 aa17.77■□□□□ 0.43
SNRNP70-203ENST00000544278 ZNF569Q5MCW4 686 aa17.77■□□□□ 0.43
SNRNP70-203ENST00000544278 BARHL2Q9NY43 387 aa17.77■□□□□ 0.43
SNRNP70-203ENST00000544278 BTAF1O14981 1849 aa17.77■□□□□ 0.43
SNRNP70-203ENST00000544278 SCN7AQ01118 1682 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 CALML3P27482 149 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 ERCC5P28715 1186 aaPredicted RBP17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 COPB1P53618 953 aaKnown RBP17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 ERVK-24P63145 666 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 STK4Q13043 487 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 CCDC34Q96HJ3 373 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 COL22A1Q8NFW1 1626 aaPredicted RBP17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 PALM3A6NDB9 673 aaPredicted RBP17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 GTPBP6O43824 516 aaPredicted RBP17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 SLC37A4O43826 429 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 LDHCP07864 332 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 KRT9P35527 623 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 CLCN6P51797 869 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 SOGA3Q5TF21 947 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 ZSCAN29Q8IWY8 852 aaPredicted RBP17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 LTBP4Q8N2S1 1624 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 B4DLN1 442 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 CABP7Q86V35 215 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 TRIML1Q8N9V2 468 aa17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 SEC63Q9UGP8 760 aaKnown RBP17.76■□□□□ 0.43
SNRNP70-203ENST00000544278 COL5A3P25940 1745 aaPredicted RBP17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 PDE4DQ08499 809 aa17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 FILIP1LQ4L180 1135 aa17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 CDKAL1Q5VV42 579 aa17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 IRF2BP1Q8IU81 584 aa17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 USP40Q9NVE5 1235 aa17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 ENC1O14682 589 aa17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 BRD2P25440 801 aaKnown RBP17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 GSTO1P78417 241 aa17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 KCTD19Q17RG1 926 aaPredicted RBP17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 QTRT2Q9H974 415 aaKnown RBP17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 CASZ1Q86V15 1759 aa17.75■□□□□ 0.43
SNRNP70-203ENST00000544278 ZSCAN12O43309 604 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 PROM2Q8N271 834 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 MCM6Q14566 821 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 ZNF397Q8NF99 534 aaPredicted RBP17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 RRP36Q96EU6 259 aaKnown RBP17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 RBM17Q96I25 401 aaKnown RBP17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 MYH8P13535 1937 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 GPR75-ASB3A0A0A6YYF3 556 aa17.74■□□□□ 0.43
SNRNP70-203ENST00000544278 MFAP3LO75121 409 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms