RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ZKSCAN3Q9BRR0 538 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 C11orf49Q9H6J7 331 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 KAT14Q9H8E8 782 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 ZNF536O15090 1300 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 ZNF543Q08ER8 600 aa27.29■■□□□ 1.96
CHFR-222ENST00000544093 SYDE2Q5VT97 1194 aa27.29■■□□□ 1.96
CHFR-222ENST00000544093 KIAA1211Q6ZU35 1233 aa27.29■■□□□ 1.96
CHFR-222ENST00000544093 TRPV1Q8NER1 839 aa27.29■■□□□ 1.96
CHFR-222ENST00000544093 RANBP17Q9H2T7 1088 aaKnown RBP27.29■■□□□ 1.96
CHFR-222ENST00000544093 PFASO15067 1338 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 TNKSO95271 1327 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 SYNGAP1Q96PV0 1343 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 ICAM1P05362 532 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 RASGRP2Q7LDG7 609 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 PNMA1Q8ND90 353 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 DIS3LQ8TF46 1054 aaKnown RBP27.28■■□□□ 1.96
CHFR-222ENST00000544093 CCDC136Q96JN2 1154 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 HOMER2Q9NSB8 354 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 RNF146Q9NTX7 359 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 CNPY2Q9Y2B0 182 aa27.28■■□□□ 1.96
CHFR-222ENST00000544093 FRMPD2Q68DX3 1309 aaPredicted RBP27.27■■□□□ 1.96
CHFR-222ENST00000544093 NEFLP07196 543 aa27.27■■□□□ 1.96
CHFR-222ENST00000544093 MNX1P50219 401 aaPredicted RBP27.27■■□□□ 1.96
CHFR-222ENST00000544093 PTH1RQ03431 593 aa27.27■■□□□ 1.96
CHFR-222ENST00000544093 MAMDC4Q6UXC1 1216 aa27.27■■□□□ 1.96
CHFR-222ENST00000544093 ENAHQ8N8S7 591 aaPredicted RBP27.27■■□□□ 1.96
CHFR-222ENST00000544093 MAP4K1Q92918 833 aa27.27■■□□□ 1.96
CHFR-222ENST00000544093 AGBL1Q96MI9 1066 aa27.27■■□□□ 1.96
CHFR-222ENST00000544093 TRERF1Q96PN7 1200 aa27.27■■□□□ 1.96
CHFR-222ENST00000544093 GPCPD1Q9NPB8 672 aa27.27■■□□□ 1.96
CHFR-222ENST00000544093 CCPG1Q9ULG6 757 aa27.27■■□□□ 1.96
CHFR-222ENST00000544093 EVI5O60447 810 aa27.26■■□□□ 1.95
CHFR-222ENST00000544093 CYP21A2P08686 494 aa27.26■■□□□ 1.95
CHFR-222ENST00000544093 TTBK2Q6IQ55 1244 aa27.26■■□□□ 1.95
CHFR-222ENST00000544093 CCDC174Q6PII3 467 aa27.26■■□□□ 1.95
CHFR-222ENST00000544093 ARRDC4Q8NCT1 418 aa27.26■■□□□ 1.95
CHFR-222ENST00000544093 ALAS1P13196 640 aa27.25■■□□□ 1.95
CHFR-222ENST00000544093 SLC16A2P36021 539 aa27.25■■□□□ 1.95
CHFR-222ENST00000544093 RALYLQ86SE5 291 aaKnown RBP27.25■■□□□ 1.95
CHFR-222ENST00000544093 DNM1LO00429 736 aa27.24■■□□□ 1.95
CHFR-222ENST00000544093 COL6A1P12109 1028 aa27.24■■□□□ 1.95
CHFR-222ENST00000544093 ASPRV1Q53RT3 343 aa27.24■■□□□ 1.95
CHFR-222ENST00000544093 IFIT1BQ5T764 474 aaKnown RBP27.24■■□□□ 1.95
CHFR-222ENST00000544093 POTEB2H3BUK9 544 aa27.23■■□□□ 1.95
CHFR-222ENST00000544093 PRAMEF19Q5SWL8 479 aa27.23■■□□□ 1.95
CHFR-222ENST00000544093 NCOA7Q8NI08 942 aa27.23■■□□□ 1.95
CHFR-222ENST00000544093 A1CFQ9NQ94 594 aaKnown RBP27.23■■□□□ 1.95
CHFR-222ENST00000544093 WDR19Q8NEZ3 1342 aa27.22■■□□□ 1.95
CHFR-222ENST00000544093 H0YGN5 161 aa27.22■■□□□ 1.95
CHFR-222ENST00000544093 AKR1A1P14550 325 aa27.22■■□□□ 1.95
CHFR-222ENST00000544093 SART3Q15020 963 aaKnown RBP27.22■■□□□ 1.95
CHFR-222ENST00000544093 CASC1Q6TDU7 716 aa27.22■■□□□ 1.95
CHFR-222ENST00000544093 ESYT1Q9BSJ8 1104 aa27.22■■□□□ 1.95
CHFR-222ENST00000544093 ERICH2A1L162 156 aa27.21■■□□□ 1.95
CHFR-222ENST00000544093 RARBP10826 455 aa27.21■■□□□ 1.95
CHFR-222ENST00000544093 SNAP25P60880 206 aa27.21■■□□□ 1.95
CHFR-222ENST00000544093 FAM133AQ8N9E0 248 aa27.21■■□□□ 1.95
CHFR-222ENST00000544093 ABHD16BQ9H3Z7 469 aa27.21■■□□□ 1.95
CHFR-222ENST00000544093 RBM8AQ9Y5S9 174 aaKnown RBP27.21■■□□□ 1.95
CHFR-222ENST00000544093 SMCHD1A6NHR9 2005 aa27.21■■□□□ 1.95
CHFR-222ENST00000544093 ALPK3Q96L96 1907 aa27.2■■□□□ 1.95
CHFR-222ENST00000544093 E7EWF7 191 aa27.2■■□□□ 1.94
CHFR-222ENST00000544093 PARP1P09874 1014 aaKnown RBP27.2■■□□□ 1.94
CHFR-222ENST00000544093 ZNF865P0CJ78 1059 aaPredicted RBP27.2■■□□□ 1.94
CHFR-222ENST00000544093 ASB14A6NK59 587 aa27.19■■□□□ 1.94
CHFR-222ENST00000544093 KBTBD13C9JR72 458 aa27.19■■□□□ 1.94
CHFR-222ENST00000544093 SEC23AQ15436 765 aa27.19■■□□□ 1.94
CHFR-222ENST00000544093 CYP39A1Q9NYL5 469 aa27.19■■□□□ 1.94
CHFR-222ENST00000544093 SNAI1O95863 264 aaPredicted RBP27.18■■□□□ 1.94
CHFR-222ENST00000544093 GOLGA8HP0CJ92 632 aa27.18■■□□□ 1.94
CHFR-222ENST00000544093 CYB5R4Q7L1T6 521 aa27.18■■□□□ 1.94
CHFR-222ENST00000544093 ARMCX2Q7L311 632 aa27.18■■□□□ 1.94
CHFR-222ENST00000544093 MAF1Q9H063 256 aa27.18■■□□□ 1.94
CHFR-222ENST00000544093 LSG1Q9H089 658 aaKnown RBP27.18■■□□□ 1.94
CHFR-222ENST00000544093 XPNPEP3Q9NQH7 507 aa27.18■■□□□ 1.94
CHFR-222ENST00000544093 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.18■■□□□ 1.94
CHFR-222ENST00000544093 FAM184BQ9ULE4 1060 aa27.18■■□□□ 1.94
CHFR-222ENST00000544093 MCM3APO60318 1980 aa27.18■■□□□ 1.94
CHFR-222ENST00000544093 LOC102724159A0A0B4J2E5 919 aa27.17■■□□□ 1.94
CHFR-222ENST00000544093 PWP2Q15269 919 aaKnown RBP27.17■■□□□ 1.94
CHFR-222ENST00000544093 MUM1L1Q5H9M0 696 aa27.17■■□□□ 1.94
CHFR-222ENST00000544093 NSMFQ6X4W1 530 aa27.17■■□□□ 1.94
CHFR-222ENST00000544093 FGD4Q96M96 766 aa27.17■■□□□ 1.94
CHFR-222ENST00000544093 ZHX1Q9UKY1 873 aaPredicted RBP27.17■■□□□ 1.94
CHFR-222ENST00000544093 IFIT3O14879 490 aaKnown RBP27.16■■□□□ 1.94
CHFR-222ENST00000544093 TAL1P17542 331 aaPredicted RBP27.16■■□□□ 1.94
CHFR-222ENST00000544093 CNTN2Q02246 1040 aa27.16■■□□□ 1.94
CHFR-222ENST00000544093 ACVR2BQ13705 512 aa27.16■■□□□ 1.94
CHFR-222ENST00000544093 ANO1Q5XXA6 986 aa27.16■■□□□ 1.94
CHFR-222ENST00000544093 RNF180Q86T96 592 aa27.16■■□□□ 1.94
CHFR-222ENST00000544093 CCDC144CPQ8IYA2 1237 aa27.16■■□□□ 1.94
CHFR-222ENST00000544093 MTA3Q9BTC8 594 aa27.16■■□□□ 1.94
CHFR-222ENST00000544093 ANO2Q9NQ90 1003 aa27.16■■□□□ 1.94
CHFR-222ENST00000544093 ADD3Q9UEY8 706 aaKnown RBP27.16■■□□□ 1.94
CHFR-222ENST00000544093 GJC2Q5T442 439 aaPredicted RBP27.15■■□□□ 1.94
CHFR-222ENST00000544093 SENP6Q9GZR1 1112 aaPredicted RBP27.15■■□□□ 1.94
CHFR-222ENST00000544093 UBA5Q9GZZ9 404 aa27.15■■□□□ 1.94
CHFR-222ENST00000544093 MYH6P13533 1939 aa27.14■■□□□ 1.94
CHFR-222ENST00000544093 CDC45O75419 566 aa27.14■■□□□ 1.94
CHFR-222ENST00000544093 WTAPQ15007 396 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms