RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 LEFTY1O75610 366 aa9.06□□□□□ -0.96
SMCO2-206ENST00000543991 GRIA2P42262 883 aa9.06□□□□□ -0.96
SMCO2-206ENST00000543991 PABPC4Q13310 644 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMCO2-206ENST00000543991 NSMFQ6X4W1 530 aa9.06□□□□□ -0.96
SMCO2-206ENST00000543991 FAM83CQ9BQN1 747 aa9.06□□□□□ -0.96
SMCO2-206ENST00000543991 PRDM5Q9NQX1 630 aaPredicted RBP9.06□□□□□ -0.96
SMCO2-206ENST00000543991 CNTNAP4Q9C0A0 1308 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 POGZQ7Z3K3 1410 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 RIMS1Q86UR5 1692 aaKnown RBP9.05□□□□□ -0.96
SMCO2-206ENST00000543991 DNAJC25-GNG10A0A024R161 153 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 FAM87AP0C7U9 286 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 SUMO1P63165 101 aaKnown RBP9.05□□□□□ -0.96
SMCO2-206ENST00000543991 CBX2Q14781 532 aaPredicted RBP9.05□□□□□ -0.96
SMCO2-206ENST00000543991 FNDC3BQ53EP0 1204 aaKnown RBP9.05□□□□□ -0.96
SMCO2-206ENST00000543991 SFRP5Q5T4F7 317 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 FAM214BQ7L5A3 538 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 NIM1KQ8IY84 436 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 BRF1Q92994 677 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 OSBP2Q969R2 916 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 MFSD3Q96ES6 412 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
SMCO2-206ENST00000543991 NOL6Q9H6R4 1146 aaKnown RBP9.05□□□□□ -0.96
SMCO2-206ENST00000543991 KCNH3Q9ULD8 1083 aa9.05□□□□□ -0.96
SMCO2-206ENST00000543991 KCNH1O95259 989 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 RAPGEF3O95398 923 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 VIL1P09327 827 aaKnown RBP9.04□□□□□ -0.96
SMCO2-206ENST00000543991 KIR3DL1P43629 444 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 SNW1Q13573 536 aaKnown RBP9.04□□□□□ -0.96
SMCO2-206ENST00000543991 TM4SF20Q53R12 229 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 GPAT2Q6NUI2 795 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 FIBCD1Q8N539 461 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 BTN2A2Q8WVV5 523 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 IER2Q9BTL4 223 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 MRPL4Q9BYD3 311 aaKnown RBP9.04□□□□□ -0.96
SMCO2-206ENST00000543991 GFOD1Q9NXC2 390 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 PTPRTO14522 1441 aa9.04□□□□□ -0.96
SMCO2-206ENST00000543991 GRB10Q13322 594 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 PPP2R5DQ14738 602 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 GTF2IRD2BQ6EKJ0 949 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 OGFOD3Q6PK18 319 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 GTF2IRD2Q86UP8 949 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 DHX37Q8IY37 1157 aaKnown RBP9.03□□□□□ -0.96
SMCO2-206ENST00000543991 DTWD2Q8NBA8 298 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 Q96M66 194 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 GTF2IRD1Q9UHL9 959 aa9.03□□□□□ -0.96
SMCO2-206ENST00000543991 SF3B6Q9Y3B4 125 aaKnown RBP9.03□□□□□ -0.96
SMCO2-206ENST00000543991 SIGLEC6O43699 453 aa9.02□□□□□ -0.97
SMCO2-206ENST00000543991 CBX7O95931 251 aa9.02□□□□□ -0.97
SMCO2-206ENST00000543991 C22orf34Q6ZV56 151 aa9.02□□□□□ -0.97
SMCO2-206ENST00000543991 TMC3Q7Z5M5 1100 aa9.02□□□□□ -0.97
SMCO2-206ENST00000543991 GATA6Q92908 595 aa9.02□□□□□ -0.97
SMCO2-206ENST00000543991 CCDC140Q96MF4 163 aa9.02□□□□□ -0.97
SMCO2-206ENST00000543991 DSCC1Q9BVC3 393 aa9.02□□□□□ -0.97
SMCO2-206ENST00000543991 ASCC2Q9H1I8 757 aaPredicted RBP9.02□□□□□ -0.97
SMCO2-206ENST00000543991 IGF2BP3O00425 579 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMCO2-206ENST00000543991 HOXC12P31275 282 aa9.01□□□□□ -0.97
SMCO2-206ENST00000543991 AMPD3Q01432 767 aa9.01□□□□□ -0.97
SMCO2-206ENST00000543991 ZAR1Q86SH2 424 aa9.01□□□□□ -0.97
SMCO2-206ENST00000543991 TBC1D32Q96NH3 1257 aa9.01□□□□□ -0.97
SMCO2-206ENST00000543991 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
SMCO2-206ENST00000543991 NKX2-4Q9H2Z4 354 aa9.01□□□□□ -0.97
SMCO2-206ENST00000543991 CHST7Q9NS84 486 aa9.01□□□□□ -0.97
SMCO2-206ENST00000543991 DISP1Q96F81 1524 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 MED1Q15648 1581 aaPredicted RBP9□□□□□ -0.97
SMCO2-206ENST00000543991 RBAK-RBAKDNI3L0D1 243 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 IRS4O14654 1257 aaPredicted RBP9□□□□□ -0.97
SMCO2-206ENST00000543991 DLX3O60479 287 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 PRAMEF1O95521 474 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 ADMP35318 185 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 CHRNA4P43681 627 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 NMIQ13287 307 aaPredicted RBP9□□□□□ -0.97
SMCO2-206ENST00000543991 CYP27C1Q4G0S4 372 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 PIWIL2Q8TC59 973 aaKnown RBP9□□□□□ -0.97
SMCO2-206ENST00000543991 ENOX1Q8TC92 643 aaKnown RBP9□□□□□ -0.97
SMCO2-206ENST00000543991 KCTD13Q8WZ19 329 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 HEXIM2Q96MH2 286 aaKnown RBP9□□□□□ -0.97
SMCO2-206ENST00000543991 ZDHHC15Q96MV8 337 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 C7orf69Q9H7B7 122 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 RAXQ9Y2V3 346 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 LTBP4Q8N2S1 1624 aa9□□□□□ -0.97
SMCO2-206ENST00000543991 IQGAP2Q13576 1575 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 HMX2A2RU54 273 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 KCNQ2O43526 872 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 ZNF865P0CJ78 1059 aaPredicted RBP8.99□□□□□ -0.97
SMCO2-206ENST00000543991 MYCLP1P12525 358 aaPredicted RBP8.99□□□□□ -0.97
SMCO2-206ENST00000543991 GFRA1P56159 465 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 AMPD2Q01433 879 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 MAP4K2Q12851 820 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 TRIM61Q5EBN2 209 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 CD163Q86VB7 1156 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 CYP26B1Q9NR63 512 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 STOML1Q9UBI4 398 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 FANCAO15360 1455 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 NEO1Q92859 1461 aa8.99□□□□□ -0.97
SMCO2-206ENST00000543991 A0A087X0B3 334 aa8.98□□□□□ -0.97
SMCO2-206ENST00000543991 C1QTNF9BB2RNN3 333 aa8.98□□□□□ -0.97
SMCO2-206ENST00000543991 VAMP4O75379 141 aa8.98□□□□□ -0.97
SMCO2-206ENST00000543991 SCG5P05408 212 aa8.98□□□□□ -0.97
SMCO2-206ENST00000543991 SNRPB2P08579 225 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms