RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 GBP6Q6ZN66 633 aa14.36□□□□□ -0.11
TUBGCP2-210ENST00000543663 STXBP4Q6ZWJ1 553 aa14.36□□□□□ -0.11
TUBGCP2-210ENST00000543663 CCDC91Q7Z6B0 441 aa14.36□□□□□ -0.11
TUBGCP2-210ENST00000543663 ARFGAP2Q8N6H7 521 aa14.36□□□□□ -0.11
TUBGCP2-210ENST00000543663 FERMT2Q96AC1 680 aa14.36□□□□□ -0.11
TUBGCP2-210ENST00000543663 SLIT3O75094 1523 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 MST1RQ04912 1400 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 RFX7Q2KHR2 1363 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 PSDA5PKW4 1024 aaPredicted RBP14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 STX10O60499 249 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 PNMA6AP0CW24 399 aaPredicted RBP14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 CDC27P30260 824 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 UAP1Q16222 522 aaPredicted RBP14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 PNMA1Q8ND90 353 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 STRBPQ96SI9 672 aaKnown RBP14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 NEDD4P46934 1319 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 USP17L8P0C7I0 530 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 CEP85LQ5SZL2 805 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 ZNF804AQ7Z570 1209 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 SYNCQ9H7C4 482 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 POLD4Q9HCU8 107 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 MAN1B1Q9UKM7 699 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 KDM6AO15550 1401 aaPredicted RBP14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 CHD2O14647 1828 aaKnown RBP14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 KCNK3O14649 394 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 GTF2IP78347 998 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 EHHADHQ08426 723 aa14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 TACO1Q9BSH4 297 aaKnown RBP14.35□□□□□ -0.11
TUBGCP2-210ENST00000543663 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 SLC7A5Q01650 507 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 E2F4Q16254 413 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 CALCRLQ16602 461 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 LRRC47Q8N1G4 583 aaKnown RBP14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 PPP1R14CQ8TAE6 165 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 ZSCAN10Q96SZ4 725 aaPredicted RBP14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 POLR3EQ9NVU0 708 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 MYO1AQ9UBC5 1043 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 CDC23Q9UJX2 597 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 IKBKGQ9Y6K9 419 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 TUBBP07437 444 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 MRPL12P52815 198 aaKnown RBP14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 MXRA7P84157 204 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 ST3GAL1Q11201 340 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 SLC44A5Q8NCS7 719 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 RIPOR2Q9Y4F9 1068 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 SRGAP2O75044 1071 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 NEBLO76041 1014 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 COPB1P53618 953 aaKnown RBP14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 CYP4A11Q02928 519 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 BLIDQ8IZY5 108 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 CPXCR1Q8N123 301 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 BAIAP2L1Q9UHR4 511 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 CAPN7Q9Y6W3 813 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 SMIM22K7EJ46 135 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 TRIM37O94972 964 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 RASSF7Q02833 373 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 CALCOCO2Q13137 446 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 REXO1Q8N1G1 1221 aaKnown RBP14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 ANKS4BQ8N8V4 417 aa14.34□□□□□ -0.11
TUBGCP2-210ENST00000543663 RGPD8O14715 1765 aaPredicted RBP14.33□□□□□ -0.11
TUBGCP2-210ENST00000543663 KRT5P13647 590 aa14.33□□□□□ -0.11
TUBGCP2-210ENST00000543663 TNFAIP3P21580 790 aa14.33□□□□□ -0.11
TUBGCP2-210ENST00000543663 GUCY1A2P33402 732 aa14.33□□□□□ -0.11
TUBGCP2-210ENST00000543663 SRGAP1Q7Z6B7 1085 aa14.33□□□□□ -0.11
TUBGCP2-210ENST00000543663 MARCH10Q8NA82 808 aaPredicted RBP14.33□□□□□ -0.11
TUBGCP2-210ENST00000543663 LMBR1Q8WVP7 490 aa14.33□□□□□ -0.11
TUBGCP2-210ENST00000543663 RPN1P04843 607 aaKnown RBP14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 POLR2FP61218 127 aaKnown RBP14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 ST5P78524 1137 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 ADCY1Q08828 1119 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 ITPK1Q13572 414 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 BRD3Q15059 726 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 RPS6KA1Q15418 735 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 ASIC2Q16515 512 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 CAPN12Q6ZSI9 719 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 TOGARAM2Q6ZUX3 1019 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 IFT20Q8IY31 132 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 TAB3Q8N5C8 712 aaPredicted RBP14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 CTTNBP2NLQ9P2B4 639 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 KLRF2D3W0D1 207 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 TRIM14Q14142 442 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 MTF1Q14872 753 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 UBE3CQ15386 1083 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 PEX26Q7Z412 305 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 PALLDQ8WX93 1383 aa14.33□□□□□ -0.12
TUBGCP2-210ENST00000543663 GCNT3O95395 438 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 TUBGCP2Q9BSJ2 902 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 SOS2Q07890 1332 aaPredicted RBP14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 CFBP00751 764 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 CCDC172P0C7W6 258 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 ACTN2P35609 894 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 TERF2Q15554 542 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 CFAP221Q4G0U5 840 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 MFSD14BQ5SR56 506 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 DPF2Q92785 391 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 SAMD15Q9P1V8 674 aa14.32□□□□□ -0.12
TUBGCP2-210ENST00000543663 RASAL2Q9UJF2 1139 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms