RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 MTMR4Q9NYA4 1195 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 PP2D1A8MPX8 630 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 RPN1P04843 607 aaKnown RBP15.72■□□□□ 0.11
MSH2-206ENST00000543555 ZNF658Q5TYW1 1059 aaPredicted RBP15.72■□□□□ 0.11
MSH2-206ENST00000543555 PIGSQ96S52 555 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 BAG1Q99933 345 aaPredicted RBP15.72■□□□□ 0.11
MSH2-206ENST00000543555 CCSER1Q9C0I3 900 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 ADD3Q9UEY8 706 aaKnown RBP15.72■□□□□ 0.11
MSH2-206ENST00000543555 TTF2Q9UNY4 1162 aaKnown RBP15.72■□□□□ 0.11
MSH2-206ENST00000543555 NRXN2Q9P2S2 1712 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 PDHBP11177 359 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 NONOQ15233 471 aaKnown RBP eCLIP15.72■□□□□ 0.11
MSH2-206ENST00000543555 NAALADL2Q58DX5 795 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 CTAGE1Q96RT6 745 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 RIOX1Q9H6W3 641 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 VAT1LQ9HCJ6 419 aa15.72■□□□□ 0.11
MSH2-206ENST00000543555 DDX4Q9NQI0 724 aaKnown RBP15.72■□□□□ 0.11
MSH2-206ENST00000543555 TEX33O43247 280 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 UBA7P41226 1012 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 SOGA3Q5TF21 947 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 RWDD2AQ9UIY3 292 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 IGKV6D-41A0A0C4DH26 115 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 STX10O60499 249 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 AKR1B1P15121 316 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 ADKP55263 362 aaKnown RBP15.71■□□□□ 0.11
MSH2-206ENST00000543555 DPP8Q6V1X1 898 aaPredicted RBP15.71■□□□□ 0.11
MSH2-206ENST00000543555 SYT10Q6XYQ8 523 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 MASTLQ96GX5 879 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 UBA5Q9GZZ9 404 aa15.71■□□□□ 0.11
MSH2-206ENST00000543555 ESYT2A0FGR8 921 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 DOK7Q18PE1 504 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 RASSF8Q8NHQ8 419 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 MXD3Q9BW11 206 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 MTFR1LQ9H019 292 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 RGPD3A6NKT7 1758 aaPredicted RBP15.7■□□□□ 0.1
MSH2-206ENST00000543555 RGPD4Q7Z3J3 1758 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 PBX1P40424 430 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 PAK1Q13153 545 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 LETM2Q2VYF4 491 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 ASPRV1Q53RT3 343 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 REXO1L1PQ8IX06 675 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 USP40Q9NVE5 1235 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
MSH2-206ENST00000543555 hCG_1984214I3L0E3 225 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 ZSCAN12O43309 604 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 CCNT1O60563 726 aaKnown RBP15.7■□□□□ 0.1
MSH2-206ENST00000543555 OR52Z1P0C646 297 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 POLD1P28340 1107 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 ETF1P62495 437 aaKnown RBP15.7■□□□□ 0.1
MSH2-206ENST00000543555 FILIP1LQ4L180 1135 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 NEK8Q86SG6 692 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 LRRC47Q8N1G4 583 aaKnown RBP15.7■□□□□ 0.1
MSH2-206ENST00000543555 ZNF713Q8N859 430 aaPredicted RBP15.7■□□□□ 0.1
MSH2-206ENST00000543555 AK8Q96MA6 479 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 SWAP70Q9UH65 585 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 SERPINB13Q9UIV8 391 aa15.7■□□□□ 0.1
MSH2-206ENST00000543555 SNHG28P0DPA3 235 aa15.69■□□□□ 0.1
MSH2-206ENST00000543555 NELFBQ8WX92 580 aa15.69■□□□□ 0.1
MSH2-206ENST00000543555 ZNF215Q9UL58 517 aaPredicted RBP15.69■□□□□ 0.1
MSH2-206ENST00000543555 MYO3BQ8WXR4 1341 aa15.69■□□□□ 0.1
MSH2-206ENST00000543555 MYL1P05976 194 aa15.69■□□□□ 0.1
MSH2-206ENST00000543555 SCNN1DP51172 638 aa15.69■□□□□ 0.1
MSH2-206ENST00000543555 REXO1Q8N1G1 1221 aaKnown RBP15.69■□□□□ 0.1
MSH2-206ENST00000543555 PDCL2Q8N4E4 241 aa15.69■□□□□ 0.1
MSH2-206ENST00000543555 GDAQ9Y2T3 454 aa15.69■□□□□ 0.1
MSH2-206ENST00000543555 PPP2R2CQ9Y2T4 447 aa15.69■□□□□ 0.1
MSH2-206ENST00000543555 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
MSH2-206ENST00000543555 COBLO75128 1261 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 NAA30Q147X3 362 aaPredicted RBP15.68■□□□□ 0.1
MSH2-206ENST00000543555 IGSF22Q8N9C0 903 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 NLGN2Q8NFZ4 835 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 TBCKQ8TEA7 893 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 L2HGDHQ9H9P8 463 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 KBTBD4Q9NVX7 518 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 LIMA1Q9UHB6 759 aaKnown RBP15.68■□□□□ 0.1
MSH2-206ENST00000543555 PRCPP42785 496 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 EIF6P56537 245 aaKnown RBP15.68■□□□□ 0.1
MSH2-206ENST00000543555 KCNB1Q14721 858 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 CDC42EP5Q6NZY7 148 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 TRIM65Q6PJ69 517 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 HHIPL2Q6UWX4 724 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 CLEC10AQ8IUN9 316 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 SLC16A10Q8TF71 515 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 KCNQ5Q9NR82 932 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 C10orf71Q711Q0 1435 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 COL11A2P13942 1736 aaPredicted RBP15.68■□□□□ 0.1
MSH2-206ENST00000543555 PHLPP2Q6ZVD8 1323 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 SLU7O95391 586 aaKnown RBP15.68■□□□□ 0.1
MSH2-206ENST00000543555 TTLL1O95922 423 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 SPAG1Q07617 926 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 ORC2Q13416 577 aaPredicted RBP15.68■□□□□ 0.1
MSH2-206ENST00000543555 CABP7Q86V35 215 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 LRRC15Q8TF66 581 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 TEKT1Q969V4 418 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 ERO1AQ96HE7 468 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 PANX2Q96RD6 677 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 TMX4Q9H1E5 349 aaPredicted RBP15.68■□□□□ 0.1
MSH2-206ENST00000543555 CUEDC2Q9H467 287 aa15.68■□□□□ 0.1
MSH2-206ENST00000543555 BIN2Q9UBW5 565 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms