RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 SAGE1Q9NXZ1 904 aa12.38□□□□□ -0.43
DDX11-225ENST00000543511 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
DDX11-225ENST00000543511 USP17L15C9J2P7 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 USP17L13C9JLJ4 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 USP17L11C9JVI0 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 USP17L18D6R9N7 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 USP17L22D6RA61 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 USP17L17D6RBQ6 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 USP17L19D6RCP7 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 USP17L20D6RJB6 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 CA12O43570 354 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 LILRB3O75022 631 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 TRPA1O75762 1119 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 SNHG28P0DPA3 235 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 CYP2C8P10632 490 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 ANAPC15P60006 121 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 USP17L24Q0WX57 530 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 CRHR2Q13324 411 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 SLFN13Q68D06 897 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 OTUD7BQ6GQQ9 843 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 CATSPERGQ6ZRH7 1159 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 DHX32Q7L7V1 743 aaKnown RBP12.37□□□□□ -0.43
DDX11-225ENST00000543511 GMCL1Q96IK5 515 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 PARK7Q99497 189 aaKnown RBP12.37□□□□□ -0.43
DDX11-225ENST00000543511 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 LRRC2Q9BYS8 371 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 BACH2Q9BYV9 841 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 TM6SF1Q9BZW5 370 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 MYH6P13533 1939 aa12.37□□□□□ -0.43
DDX11-225ENST00000543511 CASP8AP2Q9UKL3 1982 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 HMGB1P09429 215 aaKnown RBP12.36□□□□□ -0.43
DDX11-225ENST00000543511 HSPA1AP0DMV8 641 aaKnown RBP12.36□□□□□ -0.43
DDX11-225ENST00000543511 HSPA1BP0DMV9 641 aaKnown RBP12.36□□□□□ -0.43
DDX11-225ENST00000543511 PDHBP11177 359 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 CASTP20810 708 aaKnown RBP12.36□□□□□ -0.43
DDX11-225ENST00000543511 RPS6KB1P23443 525 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 PABPC4Q13310 644 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX11-225ENST00000543511 WTAPQ15007 396 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 SART3Q15020 963 aaKnown RBP12.36□□□□□ -0.43
DDX11-225ENST00000543511 IFIT1BQ5T764 474 aaKnown RBP12.36□□□□□ -0.43
DDX11-225ENST00000543511 BLOC1S2Q6QNY1 142 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 PNMA1Q8ND90 353 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 SMCHD1A6NHR9 2005 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 DOCK3Q8IZD9 2030 aa12.36□□□□□ -0.43
DDX11-225ENST00000543511 BAZ2BQ9UIF8 2168 aaKnown RBP12.35□□□□□ -0.43
DDX11-225ENST00000543511 FOXN1O15353 648 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 TLR2O60603 784 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 PSMA5P28066 241 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 LIFRP42702 1097 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 SLC1A4P43007 532 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
DDX11-225ENST00000543511 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
DDX11-225ENST00000543511 LBX2Q6XYB7 198 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 KIF2CQ99661 725 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 AGXT2Q9BYV1 514 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 TANGO6Q9C0B7 1094 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 ZFYVE28Q9HCC9 887 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 FBXO28Q9NVF7 368 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 MYPNQ86TC9 1320 aa12.35□□□□□ -0.43
DDX11-225ENST00000543511 ERICH2A1L162 156 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 FLOT1O75955 427 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 HSPA8P11142 646 aaKnown RBP12.34□□□□□ -0.43
DDX11-225ENST00000543511 BCRP11274 1271 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 BMP3P12645 472 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 HERVK_113P62684 666 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 ZNF543Q08ER8 600 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 C17orf99Q6UX52 265 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 RUFY3Q7L099 469 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 ATG4CQ96DT6 458 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
DDX11-225ENST00000543511 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
DDX11-225ENST00000543511 PPP1R9AQ9ULJ8 1098 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 MTMR7Q9Y216 660 aa12.34□□□□□ -0.43
DDX11-225ENST00000543511 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
DDX11-225ENST00000543511 PLXNB2O15031 1838 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 PEX10O60683 326 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 CNMDO75829 334 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 GCGRP47871 477 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 PSEN2P49810 448 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 TROAPQ12815 778 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 TOB2Q14106 344 aaPredicted RBP12.33□□□□□ -0.44
DDX11-225ENST00000543511 COG2Q14746 738 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 GRM4Q14833 912 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 CCDC96Q2M329 555 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 NOM1Q5C9Z4 860 aaKnown RBP12.33□□□□□ -0.44
DDX11-225ENST00000543511 TTBK2Q6IQ55 1244 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 ZNF654Q8IZM8 581 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 TBC1D32Q96NH3 1257 aa12.33□□□□□ -0.44
DDX11-225ENST00000543511 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms