RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 PRCPP42785 496 aa15.46■□□□□ 0.07
SLC3A2-220ENST00000542922 KRT31Q15323 416 aa15.46■□□□□ 0.07
SLC3A2-220ENST00000542922 ZNF658Q5TYW1 1059 aaPredicted RBP15.46■□□□□ 0.07
SLC3A2-220ENST00000542922 GALNT17Q6IS24 598 aa15.46■□□□□ 0.07
SLC3A2-220ENST00000542922 COA7Q96BR5 231 aa15.46■□□□□ 0.07
SLC3A2-220ENST00000542922 COA1Q9GZY4 146 aa15.46■□□□□ 0.07
SLC3A2-220ENST00000542922 MTMR4Q9NYA4 1195 aa15.46■□□□□ 0.07
SLC3A2-220ENST00000542922 A0A0U1RQJ8 604 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 SOWAHDA6NJG2 315 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 PMS1P54277 932 aaKnown RBP15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 ETF1P62495 437 aaKnown RBP15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 PAK1Q13153 545 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 CT47A1Q5JQC4 288 aaPredicted RBP15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 IGSF22Q8N9C0 903 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 ATRIPQ8WXE1 791 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 CCDC94Q9BW85 323 aaPredicted RBP15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 L2HGDHQ9H9P8 463 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 GPCPD1Q9NPB8 672 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 TAB2Q9NYJ8 693 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 PLIN4Q96Q06 1357 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 KLRC4O43908 158 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 NFIAQ12857 509 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 NONOQ15233 471 aaKnown RBP eCLIP15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 SYCP1Q15431 976 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 ELF2Q15723 593 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 SHROOM1Q2M3G4 852 aaPredicted RBP15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 TBCKQ8TEA7 893 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 ZC3H12CQ9C0D7 883 aaKnown RBP15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 USP40Q9NVE5 1235 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 SEC63Q9UGP8 760 aaKnown RBP15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 RWDD2AQ9UIY3 292 aa15.45■□□□□ 0.06
SLC3A2-220ENST00000542922 IGKV6D-41A0A0C4DH26 115 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 OR52Z1P0C646 297 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 PLCG1P19174 1290 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 UBA7P41226 1012 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 KMT5BQ4FZB7 885 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 CCDC93Q567U6 631 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 KRT25Q7Z3Z0 450 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 CREBRFQ8IUR6 639 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 ZFPM1Q8IX07 1006 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 PYM1Q9BRP8 204 aaKnown RBP15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 VPS16Q9H269 839 aa15.44■□□□□ 0.06
SLC3A2-220ENST00000542922 AKR1B15C9JRZ8 316 aaPredicted RBP15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 RNF225M0QZC1 329 aaPredicted RBP15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 EDIL3O43854 480 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 STX10O60499 249 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 SLU7O95391 586 aaKnown RBP15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 SHMT1P34896 483 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 FXR1P51114 621 aaKnown RBP eCLIP15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 CACNB3P54284 484 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 TTBK2Q6IQ55 1244 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 CDC42EP5Q6NZY7 148 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 CCSER1Q9C0I3 900 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 RIOX1Q9H6W3 641 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 MRPL44Q9H9J2 332 aaKnown RBP15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 DBNDD1Q9H9R9 158 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 C6orf50Q9HD87 102 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 MYH4Q9Y623 1939 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 FAM196BA6NMK8 535 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 PPP1R11O60927 126 aaPredicted RBP15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 GYPCP04921 128 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 TECP42680 631 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 RAD9BQ6WBX8 426 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 NEK8Q86SG6 692 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 FCHSD1Q86WN1 690 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 WDR24Q96S15 920 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 KBTBD4Q9NVX7 518 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 SCN9AQ15858 1988 aa15.43■□□□□ 0.06
SLC3A2-220ENST00000542922 SIPA1L1O43166 1804 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 MMP10P09238 476 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 CASP14P31944 242 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 PRPHP41219 470 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 CABP7Q86V35 215 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 IRF2BP1Q8IU81 584 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 REXO1Q8N1G1 1221 aaKnown RBP15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 ERO1AQ96HE7 468 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 MMTAG2Q9BU76 263 aaKnown RBP15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 LIMA1Q9UHB6 759 aaKnown RBP15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 KCNJ18B7U540 433 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 SLC37A4O43826 429 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 NPR1P16066 1061 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 SLC16A2P36021 539 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 COPB1P53618 953 aaKnown RBP15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 KCNJ12Q14500 433 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 TCP11X2Q5H9J9 407 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 APOBEC3HQ6NTF7 200 aaKnown RBP15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 TMC4Q7Z404 712 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 ADSSL1Q8N142 457 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 CCDC12Q8WUD4 166 aaPredicted RBP15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 EEF2KMTQ96G04 330 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 RMND1Q9NWS8 449 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 SERPINB13Q9UIV8 391 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 PHLPP2Q6ZVD8 1323 aa15.42■□□□□ 0.06
SLC3A2-220ENST00000542922 GREB1LQ9C091 1923 aaPredicted RBP15.41■□□□□ 0.06
SLC3A2-220ENST00000542922 N4BP3O15049 544 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms