RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 GSNP06396 782 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 ENDOUP21128 410 aaKnown RBP7.98□□□□□ -1.13
XRCC4-206ENST00000542685 DEKP35659 375 aaKnown RBP7.98□□□□□ -1.13
XRCC4-206ENST00000542685 LINC00310P59036 64 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 KIR3DS1Q14943 382 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 CWF19L1Q69YN2 538 aaKnown RBP7.98□□□□□ -1.13
XRCC4-206ENST00000542685 CIAPIN1Q6FI81 312 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 METTL16Q86W50 562 aaKnown RBP7.98□□□□□ -1.13
XRCC4-206ENST00000542685 LSRQ86X29 649 aaPredicted RBP7.98□□□□□ -1.13
XRCC4-206ENST00000542685 RBBP8NLQ8NC74 664 aaPredicted RBP7.98□□□□□ -1.13
XRCC4-206ENST00000542685 BRF1Q92994 677 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 CRBNQ96SW2 442 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 CRTAC1Q9NQ79 661 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 PRR13Q9NZ81 148 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 TAF6LQ9Y6J9 622 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 KIF21BO75037 1637 aa7.98□□□□□ -1.13
XRCC4-206ENST00000542685 TEX51A0A1B0GUA7 166 aa7.97□□□□□ -1.13
XRCC4-206ENST00000542685 NUAK1O60285 661 aa7.97□□□□□ -1.13
XRCC4-206ENST00000542685 SEMA7AO75326 666 aa7.97□□□□□ -1.13
XRCC4-206ENST00000542685 HSF5Q4G112 596 aaPredicted RBP7.97□□□□□ -1.13
XRCC4-206ENST00000542685 C9orf131Q5VYM1 1079 aa7.97□□□□□ -1.13
XRCC4-206ENST00000542685 GALNT18Q6P9A2 607 aa7.97□□□□□ -1.13
XRCC4-206ENST00000542685 SMARCC1Q92922 1105 aaPredicted RBP7.97□□□□□ -1.13
XRCC4-206ENST00000542685 MRRFQ96E11 262 aaKnown RBP7.97□□□□□ -1.13
XRCC4-206ENST00000542685 EFR3BQ9Y2G0 817 aa7.97□□□□□ -1.13
XRCC4-206ENST00000542685 CECR2Q9BXF3 1484 aa7.96□□□□□ -1.13
XRCC4-206ENST00000542685 WTIPA6NIX2 430 aaPredicted RBP7.96□□□□□ -1.14
XRCC4-206ENST00000542685 H0Y8X5 98 aa7.96□□□□□ -1.14
XRCC4-206ENST00000542685 GSTM1P09488 218 aa7.96□□□□□ -1.14
XRCC4-206ENST00000542685 PNLIPP16233 465 aa7.96□□□□□ -1.14
XRCC4-206ENST00000542685 ZNF445P59923 1031 aa7.96□□□□□ -1.14
XRCC4-206ENST00000542685 SRSF3P84103 164 aaKnown RBP7.96□□□□□ -1.14
XRCC4-206ENST00000542685 RTP2Q5QGT7 225 aa7.96□□□□□ -1.14
XRCC4-206ENST00000542685 GP6Q9HCN6 339 aa7.96□□□□□ -1.14
XRCC4-206ENST00000542685 SMARCA2P51531 1590 aa7.96□□□□□ -1.14
XRCC4-206ENST00000542685 SMARCA4P51532 1647 aa7.96□□□□□ -1.14
XRCC4-206ENST00000542685 CEP162Q5TB80 1403 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 PRKCAP17252 672 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 CD247P20963 164 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 COL9A2Q14055 689 aaPredicted RBP7.95□□□□□ -1.14
XRCC4-206ENST00000542685 ANKRD39Q53RE8 183 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 SLCO6A1Q86UG4 719 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 SIAH1Q8IUQ4 282 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 NAT16Q8N8M0 369 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 GPRASP2Q96D09 838 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 SLC12A9Q9BXP2 914 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 IRF2BPLQ9H1B7 796 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 GCM1Q9NP62 436 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 ZNF214Q9UL59 606 aaPredicted RBP7.95□□□□□ -1.14
XRCC4-206ENST00000542685 ZNF451Q9Y4E5 1061 aa7.95□□□□□ -1.14
XRCC4-206ENST00000542685 ARL4AP40617 200 aa7.94□□□□□ -1.14
XRCC4-206ENST00000542685 EIF6P56537 245 aaKnown RBP7.94□□□□□ -1.14
XRCC4-206ENST00000542685 HDLBPQ00341 1268 aaKnown RBP7.94□□□□□ -1.14
XRCC4-206ENST00000542685 NT5DC4Q86YG4 428 aa7.94□□□□□ -1.14
XRCC4-206ENST00000542685 FIBCD1Q8N539 461 aa7.94□□□□□ -1.14
XRCC4-206ENST00000542685 TMEM52Q8NDY8 209 aa7.94□□□□□ -1.14
XRCC4-206ENST00000542685 NUP43Q8NFH3 380 aa7.94□□□□□ -1.14
XRCC4-206ENST00000542685 SIRT5Q9NXA8 310 aa7.94□□□□□ -1.14
XRCC4-206ENST00000542685 CNOT6Q9ULM6 557 aaKnown RBP7.94□□□□□ -1.14
XRCC4-206ENST00000542685 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.94□□□□□ -1.14
XRCC4-206ENST00000542685 LTBP3Q9NS15 1303 aa7.94□□□□□ -1.14
XRCC4-206ENST00000542685 PEG3Q9GZU2 1588 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 A0A1W2PQ45 241 aaPredicted RBP7.93□□□□□ -1.14
XRCC4-206ENST00000542685 A0A1W2PQY0 241 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 VIPR1P32241 457 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 RANGAP1P46060 587 aaPredicted RBP7.93□□□□□ -1.14
XRCC4-206ENST00000542685 SOX9P48436 509 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 CEBPAP49715 358 aaPredicted RBP7.93□□□□□ -1.14
XRCC4-206ENST00000542685 CYP4F8P98187 520 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 LCE1DQ5T752 114 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 SPATA32Q96LK8 384 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 NOL6Q9H6R4 1146 aaKnown RBP7.93□□□□□ -1.14
XRCC4-206ENST00000542685 FHOD1Q9Y613 1164 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 GOLGA3Q08378 1498 aa7.93□□□□□ -1.14
XRCC4-206ENST00000542685 MPOP05164 745 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 ITGA4P13612 1032 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 ERVFRD-1P60508 538 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 TCEAL1Q15170 157 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 GNPTABQ3T906 1256 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 AMIGO3Q86WK7 504 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 ZDHHC15Q96MV8 337 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 JMJD8Q96S16 334 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 IMPACTQ9P2X3 320 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 MBD1Q9UIS9 605 aaPredicted RBP7.92□□□□□ -1.14
XRCC4-206ENST00000542685 PCDHB10Q9UN67 800 aa7.92□□□□□ -1.14
XRCC4-206ENST00000542685 BAZ1BQ9UIG0 1483 aaKnown RBP7.92□□□□□ -1.14
XRCC4-206ENST00000542685 A0A1W2PQ27 194 aa7.91□□□□□ -1.14
XRCC4-206ENST00000542685 A0A1W2PQ64 194 aa7.91□□□□□ -1.14
XRCC4-206ENST00000542685 A0A1W2PQC6 194 aa7.91□□□□□ -1.14
XRCC4-206ENST00000542685 A0A1W2PQD8 194 aa7.91□□□□□ -1.14
XRCC4-206ENST00000542685 NOP2P46087 812 aaKnown RBP7.91□□□□□ -1.14
XRCC4-206ENST00000542685 LAPTM5Q13571 262 aa7.91□□□□□ -1.14
XRCC4-206ENST00000542685 PPP2R5DQ14738 602 aa7.91□□□□□ -1.14
XRCC4-206ENST00000542685 LCE4AQ5TA78 99 aa7.91□□□□□ -1.14
XRCC4-206ENST00000542685 JAMLQ86YT9 394 aa7.91□□□□□ -1.14
XRCC4-206ENST00000542685 SRRTQ9BXP5 876 aaKnown RBP7.91□□□□□ -1.14
XRCC4-206ENST00000542685 KIAA1522Q9P206 1035 aaPredicted RBP7.91□□□□□ -1.14
XRCC4-206ENST00000542685 SF3B6Q9Y3B4 125 aaKnown RBP7.91□□□□□ -1.14
XRCC4-206ENST00000542685 NUDT19A8MXV4 375 aa7.9□□□□□ -1.14
XRCC4-206ENST00000542685 HRKO00198 91 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms