RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 ICA1Q05084 483 aa16.79■□□□□ 0.28
DDX11-219ENST00000542242 SF3A1Q15459 793 aaKnown RBP16.79■□□□□ 0.28
DDX11-219ENST00000542242 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
DDX11-219ENST00000542242 CCDC183Q5T5S1 534 aa16.79■□□□□ 0.28
DDX11-219ENST00000542242 ERO1BQ86YB8 467 aa16.79■□□□□ 0.28
DDX11-219ENST00000542242 REM2Q8IYK8 340 aaPredicted RBP16.79■□□□□ 0.28
DDX11-219ENST00000542242 LINC00301Q8NCQ3 95 aa16.79■□□□□ 0.28
DDX11-219ENST00000542242 OXER1Q8TDS5 423 aa16.79■□□□□ 0.28
DDX11-219ENST00000542242 OPTNQ96CV9 577 aa16.79■□□□□ 0.28
DDX11-219ENST00000542242 SH3GLB2Q9NR46 395 aa16.79■□□□□ 0.28
DDX11-219ENST00000542242 HTTP42858 3142 aa16.79■□□□□ 0.28
DDX11-219ENST00000542242 GOLGA6L3A6NEY3 463 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 SPTLC2O15270 562 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 CALML3P27482 149 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 ME1P48163 572 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 ZNF543Q08ER8 600 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 NR5A1Q13285 461 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 PPIL2Q13356 520 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 MOGSQ13724 837 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 CCDC96Q2M329 555 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 SCYL3Q8IZE3 742 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 KCNG4Q8TDN1 519 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 MKL1Q969V6 931 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 RRP36Q96EU6 259 aaKnown RBP16.78■□□□□ 0.28
DDX11-219ENST00000542242 PTPN18Q99952 460 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 GPCPD1Q9NPB8 672 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 KCNH4Q9UQ05 1017 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 CSADQ9Y600 493 aa16.78■□□□□ 0.28
DDX11-219ENST00000542242 CTNND1O60716 968 aaKnown RBP16.77■□□□□ 0.28
DDX11-219ENST00000542242 GH2P01242 217 aa16.77■□□□□ 0.28
DDX11-219ENST00000542242 LIG1P18858 919 aa16.77■□□□□ 0.28
DDX11-219ENST00000542242 PPATQ06203 517 aa16.77■□□□□ 0.28
DDX11-219ENST00000542242 MKRN3Q13064 507 aaKnown RBP16.77■□□□□ 0.28
DDX11-219ENST00000542242 CCDC148Q8NFR7 591 aa16.77■□□□□ 0.28
DDX11-219ENST00000542242 GPKOWQ92917 476 aaPredicted RBP eCLIP16.77■□□□□ 0.28
DDX11-219ENST00000542242 CFHR5Q9BXR6 569 aa16.77■□□□□ 0.28
DDX11-219ENST00000542242 CPVLQ9H3G5 476 aa16.77■□□□□ 0.28
DDX11-219ENST00000542242 RIOX1Q9H6W3 641 aa16.77■□□□□ 0.28
DDX11-219ENST00000542242 SEC63Q9UGP8 760 aaKnown RBP16.77■□□□□ 0.28
DDX11-219ENST00000542242 ISY1Q9ULR0 285 aaKnown RBP16.77■□□□□ 0.28
DDX11-219ENST00000542242 IGF2BP3O00425 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDX11-219ENST00000542242 IRF6O14896 467 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 PTPRAP18433 802 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 CAP2P40123 477 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 SLC39A14Q15043 492 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 RILPL1Q5EBL4 403 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 GPATCH4Q5T3I0 446 aaKnown RBP16.76■□□□□ 0.27
DDX11-219ENST00000542242 WWC2Q6AWC2 1192 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 HEATR3Q7Z4Q2 680 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 FAM177A1Q8N128 213 aaPredicted RBP16.76■□□□□ 0.27
DDX11-219ENST00000542242 DCAF4Q8WV16 495 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 BRI3BPQ8WY22 251 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 MCOLN1Q9GZU1 580 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 RNF186Q9NXI6 227 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 SAGE1Q9NXZ1 904 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.76■□□□□ 0.27
DDX11-219ENST00000542242 PCDHA7Q9UN72 937 aa16.76■□□□□ 0.27
DDX11-219ENST00000542242 SYCE3A1L190 88 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 MANSC4A6NHS7 340 aaPredicted RBP16.75■□□□□ 0.27
DDX11-219ENST00000542242 STXBP3O00186 592 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 LETM1O95202 739 aaPredicted RBP16.75■□□□□ 0.27
DDX11-219ENST00000542242 DGKZQ13574 1117 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 NPY5RQ15761 445 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
DDX11-219ENST00000542242 SLFN13Q68D06 897 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 HOMER1Q86YM7 354 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
DDX11-219ENST00000542242 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 PIGSQ96S52 555 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
DDX11-219ENST00000542242 NOL7Q9UMY1 257 aaKnown RBP16.75■□□□□ 0.27
DDX11-219ENST00000542242 RAD21O60216 631 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 TOB1P50616 345 aaPredicted RBP16.74■□□□□ 0.27
DDX11-219ENST00000542242 INHBEP58166 350 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 PTPAQ15257 358 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 GALNT17Q6IS24 598 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 SIAH1Q8IUQ4 282 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 BLIDQ8IZY5 108 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 FSIP1Q8NA03 581 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
DDX11-219ENST00000542242 TNFRSF25Q93038 417 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 ARHGEF10LQ9HCE6 1279 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 DDX19AQ9NUU7 478 aaKnown RBP16.74■□□□□ 0.27
DDX11-219ENST00000542242 AFG3L2Q9Y4W6 797 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 CENPFP49454 3210 aa16.74■□□□□ 0.27
DDX11-219ENST00000542242 A0A1W2PQ27 194 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 A0A1W2PQ64 194 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 A0A1W2PQD8 194 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 PPP6R2O75170 966 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 SLC1A4P43007 532 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 NAPAP54920 295 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 SREBF2Q12772 1141 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 ADALQ6DHV7 355 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 TTBK2Q6IQ55 1244 aa16.73■□□□□ 0.27
DDX11-219ENST00000542242 LRSAM1Q6UWE0 723 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms