RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 NUDCQ9Y266 331 aa7.1□□□□□ -1.27
CPSF7-220ENST00000541963 MRVI1Q9Y6F6 885 aa7.1□□□□□ -1.27
CPSF7-220ENST00000541963 RGPD3A6NKT7 1758 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-220ENST00000541963 RGPD4Q7Z3J3 1758 aa7.1□□□□□ -1.27
CPSF7-220ENST00000541963 NCAPD2Q15021 1401 aa7.1□□□□□ -1.27
CPSF7-220ENST00000541963 NHSQ6T4R5 1651 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 PRAMEF27A3QJZ7 478 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 PHKG2P15735 406 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 ETF1P62495 437 aaKnown RBP7.09□□□□□ -1.27
CPSF7-220ENST00000541963 INPP5AQ14642 412 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 SLC15A2Q16348 729 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 LRFN4Q6PJG9 635 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 CCDC81Q6ZN84 652 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 CDC37L1Q7L3B6 337 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 C12orf40Q86WS4 652 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 WDR89Q96FK6 387 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-220ENST00000541963 ATXN3LQ9H3M9 355 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 EHMT1Q9H9B1 1298 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 TMOD3Q9NYL9 352 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 AP4E1Q9UPM8 1137 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 CSADQ9Y600 493 aa7.09□□□□□ -1.27
CPSF7-220ENST00000541963 ERVV-2B6SEH9 535 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 GFRA2O00451 464 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 TM4SF5O14894 197 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 SART1O43290 800 aaKnown RBP7.08□□□□□ -1.28
CPSF7-220ENST00000541963 ATE1O95260 518 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 SPATA31C1P0DKV0 1188 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 PLCG1P19174 1290 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 CLCQ05315 142 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 ZC3H12AQ5D1E8 599 aaKnown RBP7.08□□□□□ -1.28
CPSF7-220ENST00000541963 ANKRD34AQ69YU3 496 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 ZNF530Q6P9A1 599 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-220ENST00000541963 CYFIP1Q7L576 1253 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 SMG8Q8ND04 991 aaKnown RBP7.08□□□□□ -1.28
CPSF7-220ENST00000541963 DCAF5Q96JK2 942 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 TMPRSS13Q9BYE2 586 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 TRIM55Q9BYV6 548 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 PIDD1Q9HB75 910 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 SPON1Q9HCB6 807 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 CCNL1Q9UK58 526 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-220ENST00000541963 ZNRF3Q9ULT6 936 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 RREB1Q92766 1687 aa7.08□□□□□ -1.28
CPSF7-220ENST00000541963 BTAF1O14981 1849 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 FANCGO15287 622 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 HTR3BO95264 441 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 DLGAP3O95886 979 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 NEFMP07197 916 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 PPP2R1AP30153 589 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 ERVK-24P63145 666 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-220ENST00000541963 KIAA1211Q6ZU35 1233 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 DPH6Q7L8W6 267 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 DYMQ7RTS9 669 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 TMEM130Q8N3G9 435 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 ZNF507Q8TCN5 953 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 CEP41Q9BYV8 373 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 SUGCTQ9HAC7 445 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 SSU72Q9NP77 194 aaKnown RBP7.07□□□□□ -1.28
CPSF7-220ENST00000541963 PRKAG3Q9UGI9 489 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 ADAMTS8Q9UP79 889 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 POLR3KQ9Y2Y1 108 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-220ENST00000541963 NUP188Q5SRE5 1749 aa7.07□□□□□ -1.28
CPSF7-220ENST00000541963 CNTNAP5Q8WYK1 1306 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 FAM181BA6NEQ2 426 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 C9orf172C9J069 976 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 WISP1O95388 367 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 PGRP06401 933 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 HMOX1P09601 288 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 GRK4P32298 578 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 ETFBP38117 255 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 CDK8P49336 464 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 SOX4Q06945 474 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-220ENST00000541963 DDX10Q13206 875 aaKnown RBP7.06□□□□□ -1.28
CPSF7-220ENST00000541963 RALBP1Q15311 655 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-220ENST00000541963 ANKS3Q6ZW76 656 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 KCT2Q8NC54 265 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 FLAD1Q8NFF5 587 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 PIGBQ92521 554 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 WNT10AQ9GZT5 417 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 PNNQ9H307 717 aaKnown RBP7.06□□□□□ -1.28
CPSF7-220ENST00000541963 AKTIPQ9H8T0 292 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 TFCP2L1Q9NZI6 479 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 HIF3AQ9Y2N7 669 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 PKD1L3Q7Z443 1732 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 DOT1LQ8TEK3 1739 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 SHANK3Q9BYB0 1731 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 KDRP35968 1356 aa7.06□□□□□ -1.28
CPSF7-220ENST00000541963 TMPRSS2O15393 492 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 RNGTTO60942 597 aaKnown RBP7.05□□□□□ -1.28
CPSF7-220ENST00000541963 GIPRP48546 466 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 USP11P51784 963 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 GRIK4Q16099 956 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.05□□□□□ -1.28
CPSF7-220ENST00000541963 RBBP8NLQ8NC74 664 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-220ENST00000541963 LENG1Q96BZ8 264 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-220ENST00000541963 SHDQ96IW2 340 aa7.05□□□□□ -1.28
CPSF7-220ENST00000541963 LNPKQ9C0E8 428 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms