RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 USP17L17D6RBQ6 530 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 USP17L19D6RCP7 530 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 USP17L20D6RJB6 530 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 ZBTB5O15062 677 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 PPP1R11O60927 126 aaPredicted RBP14.41□□□□□ -0.1
LMO3-228ENST00000541846 ZSCAN22P10073 491 aaPredicted RBP14.41□□□□□ -0.1
LMO3-228ENST00000541846 USP17L24Q0WX57 530 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 NOGQ13253 232 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 TRIM29Q14134 588 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 CDC37Q16543 378 aaPredicted RBP14.41□□□□□ -0.1
LMO3-228ENST00000541846 CCL15Q16663 113 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 TREML2Q5T2D2 321 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
LMO3-228ENST00000541846 ANKRD23Q86SG2 305 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
LMO3-228ENST00000541846 RGS22Q8NE09 1264 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 ZIC5Q96T25 663 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 SLF1Q9BQI6 1058 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
LMO3-228ENST00000541846 KCNJ14Q9UNX9 436 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 AGTPBP1Q9UPW5 1226 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 TCHHQ07283 1943 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 A0A0G2JMZ2 1700 aa14.41□□□□□ -0.1
LMO3-228ENST00000541846 hCG_1984214I3L0E3 225 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 STXBP3O00186 592 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 FLOT1O75955 427 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 F13A1P00488 732 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 XBP1P17861 261 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 MAP2K2P36507 400 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 VEGFBP49765 207 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 HTRA3P83110 453 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 KIF23Q02241 960 aaPredicted RBP14.4□□□□□ -0.1
LMO3-228ENST00000541846 MKRN3Q13064 507 aaKnown RBP14.4□□□□□ -0.1
LMO3-228ENST00000541846 TYW1BQ6NUM6 668 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 HEATR3Q7Z4Q2 680 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 ZNF713Q8N859 430 aaPredicted RBP14.4□□□□□ -0.1
LMO3-228ENST00000541846 PRPF38AQ8NAV1 312 aaKnown RBP14.4□□□□□ -0.1
LMO3-228ENST00000541846 PHF20Q9BVI0 1012 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 RANBP17Q9H2T7 1088 aaKnown RBP14.4□□□□□ -0.1
LMO3-228ENST00000541846 SH3GLB2Q9NR46 395 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 BARHL2Q9NY43 387 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 PPP1R9AQ9ULJ8 1098 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 ADAMTS5Q9UNA0 930 aa14.4□□□□□ -0.1
LMO3-228ENST00000541846 BTBD19C9JJ37 291 aa14.39□□□□□ -0.11
LMO3-228ENST00000541846 MMP1P03956 469 aa14.39□□□□□ -0.11
LMO3-228ENST00000541846 DSG3P32926 999 aa14.39□□□□□ -0.11
LMO3-228ENST00000541846 FERMT3Q86UX7 667 aa14.39□□□□□ -0.11
LMO3-228ENST00000541846 COA7Q96BR5 231 aa14.39□□□□□ -0.11
LMO3-228ENST00000541846 ATG4CQ96DT6 458 aa14.39□□□□□ -0.11
LMO3-228ENST00000541846 HOXC10Q9NYD6 342 aa14.39□□□□□ -0.11
LMO3-228ENST00000541846 MYPNQ86TC9 1320 aa14.39□□□□□ -0.11
LMO3-228ENST00000541846 PCNTO95613 3336 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 RBBP6Q7Z6E9 1792 aaKnown RBP14.38□□□□□ -0.11
LMO3-228ENST00000541846 NAPAP54920 295 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 SREBF2Q12772 1141 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 RESTQ13127 1097 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 PABPC4Q13310 644 aaKnown RBP eCLIP14.38□□□□□ -0.11
LMO3-228ENST00000541846 COG2Q14746 738 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 NPY5RQ15761 445 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 MCTP1Q6DN14 999 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 POTEEQ6S8J3 1075 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 LBX2Q6XYB7 198 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 FBXO11Q86XK2 927 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 FAM177A1Q8N128 213 aaPredicted RBP14.38□□□□□ -0.11
LMO3-228ENST00000541846 FAM43AQ8N2R8 423 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 CCDC148Q8NFR7 591 aa14.38□□□□□ -0.11
LMO3-228ENST00000541846 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 PDHXO00330 501 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 IGF2BP3O00425 579 aaKnown RBP eCLIP14.37□□□□□ -0.11
LMO3-228ENST00000541846 AOC2O75106 756 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 NLRP5P59047 1200 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 PPP1R18Q6NYC8 613 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 CCDC174Q6PII3 467 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 DIS3L2Q8IYB7 885 aaKnown RBP14.37□□□□□ -0.11
LMO3-228ENST00000541846 DNAJC5GQ8N7S2 189 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 CCDC12Q8WUD4 166 aaPredicted RBP14.37□□□□□ -0.11
LMO3-228ENST00000541846 TNPO1Q92973 898 aaKnown RBP14.37□□□□□ -0.11
LMO3-228ENST00000541846 P2RX7Q99572 595 aaKnown RBP14.37□□□□□ -0.11
LMO3-228ENST00000541846 AMNQ9BXJ7 453 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 ASCC2Q9H1I8 757 aaPredicted RBP14.37□□□□□ -0.11
LMO3-228ENST00000541846 SLC38A10Q9HBR0 1119 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 PCDHA1Q9Y5I3 950 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 ZNF536O15090 1300 aa14.37□□□□□ -0.11
LMO3-228ENST00000541846 ESYT2A0FGR8 921 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 SPDYE16A6NNV3 312 aaPredicted RBP14.36□□□□□ -0.11
LMO3-228ENST00000541846 BTBD18B2RXH4 712 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 VWA5AO00534 786 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 ADAMTS3O15072 1205 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 FDX1P10109 184 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 TAL1P17542 331 aaPredicted RBP14.36□□□□□ -0.11
LMO3-228ENST00000541846 OSBPP22059 807 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 CALML3P27482 149 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
LMO3-228ENST00000541846 SAFBQ15424 915 aaKnown RBP eCLIP14.36□□□□□ -0.11
LMO3-228ENST00000541846 USH1GQ495M9 461 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
LMO3-228ENST00000541846 DAGLBQ8NCG7 672 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 REPS2Q8NFH8 660 aa14.36□□□□□ -0.11
LMO3-228ENST00000541846 OXER1Q8TDS5 423 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms