RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 ATP1A2P50993 1020 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CDO1Q16878 200 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CABP7Q86V35 215 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 U2AF1L4Q8WU68 220 aaKnown RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 COPRSQ9NQ92 184 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 G3BP2Q9UN86 482 aaKnown RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 PLEKHH1Q9ULM0 1364 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 I3L4J1 428 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CIAPIN1Q6FI81 312 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 TWF2Q6IBS0 349 aaKnown RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 ZNF790Q6PG37 636 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CDC37L1Q7L3B6 337 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 RFX6Q8HWS3 928 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 BBS5Q8N3I7 341 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 TRAIPQ9BWF2 469 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 HELLSQ9NRZ9 838 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 GDAQ9Y2T3 454 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 FAM47DPA6NHR8 397 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 USP17L12C9JPN9 530 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 USP17L21D6R901 530 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 BCRP11274 1271 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 KRT3P12035 628 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CACNB1Q02641 598 aaPredicted RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 NONOQ15233 471 aaKnown RBP eCLIP6.93□□□□□ -1.3
DMD-228ENST00000541735 CCDC121Q6ZUS5 278 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 DBNDD2Q9BQY9 259 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 SAMD15Q9P1V8 674 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 KCNH4Q9UQ05 1017 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CCDC171Q6TFL3 1326 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 SUPT3HB4E1H0 165 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CASQ2O14958 399 aaPredicted RBP6.93□□□□□ -1.3
DMD-228ENST00000541735 IRF1P10914 325 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 HOXC9P31274 260 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 BFSP1Q12934 665 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 MMEL1Q495T6 779 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CREB3L3Q68CJ9 461 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 SLFN13Q68D06 897 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 TEKT3Q9BXF9 490 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 RBSNQ9H1K0 784 aa6.93□□□□□ -1.3
DMD-228ENST00000541735 CDK13Q14004 1512 aaKnown RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 IVLP07476 585 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 ODR4Q5SWX8 454 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 UHRF1BP1Q6BDS2 1440 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 ANKRD36BP1Q96IX9 119 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 EYA1Q99502 592 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 DYRK4Q9NR20 520 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 RAB20Q9NX57 234 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 PIM2Q9P1W9 311 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 ZNF215Q9UL58 517 aaPredicted RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 KIF28PB7ZC32 967 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 THAP12O43422 761 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 NDUFB5O43674 189 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 ZSCAN22P10073 491 aaPredicted RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 ACTN1P12814 892 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 YWHAEP62258 255 aaKnown RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 KCNA1Q09470 495 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 TFDP1Q14186 410 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 TTC38Q5R3I4 469 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 KRT26Q7Z3Y9 468 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 NLGN1Q8N2Q7 840 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 DNAAF3Q8N9W5 541 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 TMX3Q96JJ7 454 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 LRRC4Q9HBW1 653 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 FAM207AQ9NSI2 230 aaPredicted RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 C2CD2LO14523 706 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 CCDC26Q8TAB7 109 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 LSM14BQ9BX40 385 aaKnown RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 SRP68Q9UHB9 627 aaKnown RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 PALD1Q9ULE6 856 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 SASH1O94885 1247 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 MMP10P09238 476 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 SKILP12757 684 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 PLCD1P51178 756 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 ZNF341Q9BYN7 854 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 FPGT-TNNI3KV9GXZ4 949 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 KIAA1107Q9UPP5 1409 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 ARHGAP42A6NI28 874 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 KIF2AO00139 706 aaPredicted RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 HNRNPDLO14979 420 aaKnown RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 CTSHP09668 335 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 ATP2B4P23634 1241 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 MXD4Q14582 209 aaPredicted RBP6.92□□□□□ -1.3
DMD-228ENST00000541735 MCF2L2Q86YR7 1114 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 BHMTQ93088 406 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 C1orf112Q9NSG2 853 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 TAB2Q9NYJ8 693 aa6.92□□□□□ -1.3
DMD-228ENST00000541735 MEIS1O00470 390 aa6.91□□□□□ -1.3
DMD-228ENST00000541735 KIF3CO14782 793 aa6.91□□□□□ -1.3
DMD-228ENST00000541735 POLR2BP30876 1174 aaKnown RBP6.91□□□□□ -1.3
DMD-228ENST00000541735 PTK2BQ14289 1009 aa6.91□□□□□ -1.3
DMD-228ENST00000541735 CCDC93Q567U6 631 aa6.91□□□□□ -1.3
DMD-228ENST00000541735 REXO1Q8N1G1 1221 aaKnown RBP6.91□□□□□ -1.3
DMD-228ENST00000541735 ANLNQ9NQW6 1124 aa6.91□□□□□ -1.3
DMD-228ENST00000541735 FBXL5Q9UKA1 691 aa6.91□□□□□ -1.3
DMD-228ENST00000541735 CCDC141Q6ZP82 1450 aa6.91□□□□□ -1.3
DMD-228ENST00000541735 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.91□□□□□ -1.3
DMD-228ENST00000541735 CPB1P15086 417 aa6.91□□□□□ -1.3
DMD-228ENST00000541735 TTC31Q49AM3 519 aaPredicted RBP6.91□□□□□ -1.3
DMD-228ENST00000541735 MIS18BP1Q6P0N0 1132 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms