RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 TNNT1P13805 278 aa16.66■□□□□ 0.26
SPOCK3-226ENST00000541354 GLIPR1L2Q4G1C9 344 aa16.66■□□□□ 0.26
SPOCK3-226ENST00000541354 ANKRD7Q92527 254 aa16.66■□□□□ 0.26
SPOCK3-226ENST00000541354 XPO4Q9C0E2 1151 aaKnown RBP16.66■□□□□ 0.26
SPOCK3-226ENST00000541354 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
SPOCK3-226ENST00000541354 PTGER2P43116 358 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 TNFAIP1Q13829 316 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 ZSCAN29Q8IWY8 852 aaPredicted RBP16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 PCDHA6Q9UN73 950 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 PCDHA8Q9Y5H6 950 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 CCDC194A0A1B0GVG4 234 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 NFKBIEO00221 500 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 PLA2G6O60733 806 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 RAD17O75943 681 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 LONP1P36776 959 aaKnown RBP16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 SARSP49591 514 aaKnown RBP16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 ARID5BQ14865 1188 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 LONRF3Q496Y0 759 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 USP17L2Q6R6M4 530 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 CLIC6Q96NY7 704 aa16.65■□□□□ 0.26
SPOCK3-226ENST00000541354 KIF2AO00139 706 aaPredicted RBP16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 NAPAP54920 295 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 MYL5Q02045 173 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 UPF1Q92900 1129 aaKnown RBP eCLIP16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 FZD9O00144 591 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 TPD52L1Q16890 204 aaPredicted RBP16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 CCAR2Q8N163 923 aaKnown RBP16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 TRIML1Q8N9V2 468 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 IFNKQ9P0W0 207 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 PGAP2Q9UHJ9 254 aa16.64■□□□□ 0.25
SPOCK3-226ENST00000541354 TUBB4AP04350 444 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 FANCCQ00597 558 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 ICA1Q05084 483 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 MPHOSPH10O00566 681 aaKnown RBP16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 ZBTB5O15062 677 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 CBFA2T2O43439 604 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 SLC26A4O43511 780 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 TCP10Q12799 353 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 FILIP1Q7Z7B0 1213 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 SPATA20Q8TB22 786 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 RIC8AQ9NPQ8 531 aa16.63■□□□□ 0.25
SPOCK3-226ENST00000541354 BIN1O00499 593 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 EEF2P13639 858 aaKnown RBP16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 PNOCQ13519 176 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 C16orf45Q96MC5 204 aaPredicted RBP16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 PCDHAC2Q9Y5I4 1007 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 hCG_1642624A0A1W2PR95 340 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 PIK3AP1Q6ZUJ8 805 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 LRRC47Q8N1G4 583 aaKnown RBP16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 C4orf32Q8N8J7 132 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 AK8Q96MA6 479 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 PIGSQ96S52 555 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 JMJD4Q9H9V9 463 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 MYOZ2Q9NPC6 264 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 PCDHA5Q9Y5H7 936 aa16.62■□□□□ 0.25
SPOCK3-226ENST00000541354 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 EIF6P56537 245 aaKnown RBP16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 R3HDM1Q15032 1099 aaKnown RBP16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 EARS2Q5JPH6 523 aaKnown RBP16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 SLFN13Q68D06 897 aa16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 ARMCX5Q6P1M9 558 aa16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 ADCY7P51828 1080 aa16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 CEP135Q66GS9 1140 aa16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 SIAH1Q8IUQ4 282 aa16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 ADGRF4Q8IZF3 695 aa16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
SPOCK3-226ENST00000541354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 CACNB3P54284 484 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 MLKLQ8NB16 471 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 MAGEF1Q9HAY2 307 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 BMP6P22004 513 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 HOXA7P31268 230 aaPredicted RBP16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 MRPL12P52815 198 aaKnown RBP16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 PTPN14Q15678 1187 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 REXO1Q8N1G1 1221 aaKnown RBP16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 TMX1Q9H3N1 280 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 SMC2O95347 1197 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 MYL1P05976 194 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 CLK2P49760 499 aaKnown RBP16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 PTGDRQ13258 359 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 MORC3Q14149 939 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 SEPT2Q15019 361 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 POSTNQ15063 836 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 CSRNP2Q9H175 543 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 GOPCQ9HD26 462 aa16.6■□□□□ 0.25
SPOCK3-226ENST00000541354 USP27XA6NNY8 438 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms