RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ARMCX2Q7L311 632 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 FGD4Q96M96 766 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 ABHD16BQ9H3Z7 469 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 INCENPQ9NQS7 918 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 A0A0C4DFX4 3053 aa28.49■■■□□ 2.15
LEMD3-203ENST00000541171 LAMA2P24043 3122 aaKnown RBP28.48■■■□□ 2.15
LEMD3-203ENST00000541171 DCDC2CA8MYV0 355 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 SLC1A4P43007 532 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 EPHB4P54760 987 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 FAAP100Q0VG06 881 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 CCDC144BQ3MJ40 725 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 CCSAPQ6IQ19 270 aaPredicted RBP28.48■■■□□ 2.15
LEMD3-203ENST00000541171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.48■■■□□ 2.15
LEMD3-203ENST00000541171 CHURC1Q8WUH1 139 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 VTI1AQ96AJ9 217 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 AGBL1Q96MI9 1066 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 ZBTB47Q9UFB7 747 aaPredicted RBP28.48■■■□□ 2.15
LEMD3-203ENST00000541171 STX8Q9UNK0 236 aa28.48■■■□□ 2.15
LEMD3-203ENST00000541171 TSPY2A6NKD2 308 aa28.47■■■□□ 2.15
LEMD3-203ENST00000541171 ADCY6O43306 1168 aa28.47■■■□□ 2.15
LEMD3-203ENST00000541171 CNTN2Q02246 1040 aa28.47■■■□□ 2.15
LEMD3-203ENST00000541171 FAM160B2Q86V87 743 aa28.47■■■□□ 2.15
LEMD3-203ENST00000541171 STAG1Q8WVM7 1258 aa28.47■■■□□ 2.15
LEMD3-203ENST00000541171 RNPC3Q96LT9 517 aaKnown RBP28.47■■■□□ 2.15
LEMD3-203ENST00000541171 SEMA6BQ9H3T3 888 aa28.47■■■□□ 2.15
LEMD3-203ENST00000541171 ACAD9Q9H845 621 aa28.47■■■□□ 2.15
LEMD3-203ENST00000541171 SPC25Q9HBM1 224 aa28.47■■■□□ 2.15
LEMD3-203ENST00000541171 FDX1P10109 184 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 SNAP25P60880 206 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 SMAD3P84022 425 aaKnown RBP28.46■■■□□ 2.15
LEMD3-203ENST00000541171 FPGSQ05932 587 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 ANKRD33Q7Z3H0 272 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 CCDC144CPQ8IYA2 1237 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 GMCL1Q96IK5 515 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 GLT1D1Q96MS3 346 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 TOX2Q96NM4 488 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 CDX2Q99626 313 aaPredicted RBP28.46■■■□□ 2.15
LEMD3-203ENST00000541171 RNF146Q9NTX7 359 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 MTMR7Q9Y216 660 aa28.46■■■□□ 2.15
LEMD3-203ENST00000541171 NMT2O60551 498 aa28.45■■■□□ 2.14
LEMD3-203ENST00000541171 ANKRD45Q5TZF3 282 aa28.45■■■□□ 2.14
LEMD3-203ENST00000541171 CCDC174Q6PII3 467 aa28.45■■■□□ 2.14
LEMD3-203ENST00000541171 KCTD1Q719H9 257 aa28.45■■■□□ 2.14
LEMD3-203ENST00000541171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.45■■■□□ 2.14
LEMD3-203ENST00000541171 FOXP2O15409 715 aa28.44■■■□□ 2.14
LEMD3-203ENST00000541171 ASGR1P07306 291 aa28.44■■■□□ 2.14
LEMD3-203ENST00000541171 ALAS1P13196 640 aa28.44■■■□□ 2.14
LEMD3-203ENST00000541171 PCSK9Q8NBP7 692 aaKnown RBP28.44■■■□□ 2.14
LEMD3-203ENST00000541171 ZNF536O15090 1300 aa28.43■■■□□ 2.14
LEMD3-203ENST00000541171 RANBP6O60518 1105 aaKnown RBP28.43■■■□□ 2.14
LEMD3-203ENST00000541171 CST5P28325 142 aaPredicted RBP28.43■■■□□ 2.14
LEMD3-203ENST00000541171 GJA9P57773 515 aa28.43■■■□□ 2.14
LEMD3-203ENST00000541171 GNASQ5JWF2 1037 aa28.43■■■□□ 2.14
LEMD3-203ENST00000541171 PPP4R3BQ5MIZ7 849 aa28.43■■■□□ 2.14
LEMD3-203ENST00000541171 VPS53Q5VIR6 699 aa28.43■■■□□ 2.14
LEMD3-203ENST00000541171 NOL8Q76FK4 1167 aaKnown RBP28.43■■■□□ 2.14
LEMD3-203ENST00000541171 TRERF1Q96PN7 1200 aa28.43■■■□□ 2.14
LEMD3-203ENST00000541171 A1CFQ9NQ94 594 aaKnown RBP28.43■■■□□ 2.14
LEMD3-203ENST00000541171 IL17RBQ9NRM6 502 aa28.43■■■□□ 2.14
LEMD3-203ENST00000541171 MCM3APO60318 1980 aa28.42■■■□□ 2.14
LEMD3-203ENST00000541171 RCSD1Q6JBY9 416 aa28.42■■■□□ 2.14
LEMD3-203ENST00000541171 RASGRP2Q7LDG7 609 aa28.42■■■□□ 2.14
LEMD3-203ENST00000541171 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.42■■■□□ 2.14
LEMD3-203ENST00000541171 FAM133AQ8N9E0 248 aa28.42■■■□□ 2.14
LEMD3-203ENST00000541171 UPF3AQ9H1J1 476 aaKnown RBP28.42■■■□□ 2.14
LEMD3-203ENST00000541171 TTYH1Q9H313 450 aaPredicted RBP28.42■■■□□ 2.14
LEMD3-203ENST00000541171 ELP1O95163 1332 aa28.42■■■□□ 2.14
LEMD3-203ENST00000541171 SOWAHBA6NEL2 793 aa28.41■■■□□ 2.14
LEMD3-203ENST00000541171 TKFCQ3LXA3 575 aa28.41■■■□□ 2.14
LEMD3-203ENST00000541171 KATNBL1Q9H079 304 aa28.41■■■□□ 2.14
LEMD3-203ENST00000541171 SALL3Q9BXA9 1300 aa28.41■■■□□ 2.14
LEMD3-203ENST00000541171 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.4■■■□□ 2.14
LEMD3-203ENST00000541171 TIMP1P01033 207 aa28.4■■■□□ 2.14
LEMD3-203ENST00000541171 RRP1P56182 461 aaKnown RBP28.4■■■□□ 2.14
LEMD3-203ENST00000541171 BEX3Q00994 111 aa28.4■■■□□ 2.14
LEMD3-203ENST00000541171 MYLIPQ8WY64 445 aa28.4■■■□□ 2.14
LEMD3-203ENST00000541171 EVI5LQ96CN4 794 aa28.4■■■□□ 2.14
LEMD3-203ENST00000541171 TOMM22Q9NS69 142 aa28.4■■■□□ 2.14
LEMD3-203ENST00000541171 PRR12Q9ULL5 1215 aa28.4■■■□□ 2.14
LEMD3-203ENST00000541171 DDX49Q9Y6V7 483 aaKnown RBP28.4■■■□□ 2.14
LEMD3-203ENST00000541171 A0A0U1RQG5 324 aaPredicted RBP28.39■■■□□ 2.14
LEMD3-203ENST00000541171 PLA2G6O60733 806 aa28.39■■■□□ 2.14
LEMD3-203ENST00000541171 CDK7P50613 346 aa28.39■■■□□ 2.14
LEMD3-203ENST00000541171 TNFAIP2Q03169 654 aa28.39■■■□□ 2.14
LEMD3-203ENST00000541171 CCDC96Q2M329 555 aa28.39■■■□□ 2.14
LEMD3-203ENST00000541171 MUM1L1Q5H9M0 696 aa28.39■■■□□ 2.14
LEMD3-203ENST00000541171 CRBNQ96SW2 442 aa28.39■■■□□ 2.14
LEMD3-203ENST00000541171 TBX21Q9UL17 535 aa28.39■■■□□ 2.14
LEMD3-203ENST00000541171 MROH7Q68CQ1 1323 aa28.39■■■□□ 2.13
LEMD3-203ENST00000541171 CUL9Q8IWT3 2517 aa28.38■■■□□ 2.13
LEMD3-203ENST00000541171 ASB14A6NK59 587 aa28.38■■■□□ 2.13
LEMD3-203ENST00000541171 ARVCFO00192 962 aa28.38■■■□□ 2.13
LEMD3-203ENST00000541171 CTAGE5O15320 804 aa28.37■■■□□ 2.13
LEMD3-203ENST00000541171 RRP12Q5JTH9 1297 aaKnown RBP28.37■■■□□ 2.13
LEMD3-203ENST00000541171 MAFAQ8NHW3 353 aaPredicted RBP28.37■■■□□ 2.13
LEMD3-203ENST00000541171 ANAPC4Q9UJX5 808 aa28.37■■■□□ 2.13
LEMD3-203ENST00000541171 CCPG1Q9ULG6 757 aa28.37■■■□□ 2.13
LEMD3-203ENST00000541171 MFSD5Q6N075 450 aa28.36■■■□□ 2.13
LEMD3-203ENST00000541171 NSMFQ6X4W1 530 aa28.36■■■□□ 2.13
LEMD3-203ENST00000541171 EEPD1Q7L9B9 569 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms