RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 GMCL1P1Q8NEA9 526 aa32.01■■■□□ 2.71
CHFR-218ENST00000540963 FGD4Q96M96 766 aa32.01■■■□□ 2.71
CHFR-218ENST00000540963 TLR3O15455 904 aaKnown RBP32■■■□□ 2.71
CHFR-218ENST00000540963 GNAT2P19087 354 aa32■■■□□ 2.71
CHFR-218ENST00000540963 GNASQ5JWF2 1037 aa32■■■□□ 2.71
CHFR-218ENST00000540963 PSRC1Q6PGN9 363 aaPredicted RBP32■■■□□ 2.71
CHFR-218ENST00000540963 C16orf59Q7L2K0 433 aa32■■■□□ 2.71
CHFR-218ENST00000540963 ARMCX2Q7L311 632 aa32■■■□□ 2.71
CHFR-218ENST00000540963 FAM126BQ8IXS8 530 aa32■■■□□ 2.71
CHFR-218ENST00000540963 ZNF444Q8N0Y2 327 aaPredicted RBP32■■■□□ 2.71
CHFR-218ENST00000540963 KBTBD3Q8NAB2 608 aa32■■■□□ 2.71
CHFR-218ENST00000540963 APPBP2Q92624 585 aa32■■■□□ 2.71
CHFR-218ENST00000540963 KIFC2Q96AC6 838 aa32■■■□□ 2.71
CHFR-218ENST00000540963 RAVER2Q9HCJ3 691 aaKnown RBP32■■■□□ 2.71
CHFR-218ENST00000540963 ECHDC1Q9NTX5 307 aa32■■■□□ 2.71
CHFR-218ENST00000540963 MINDY4BA8MYZ0 360 aa31.99■■■□□ 2.71
CHFR-218ENST00000540963 ADCY6O43306 1168 aa31.99■■■□□ 2.71
CHFR-218ENST00000540963 VTI1AQ96AJ9 217 aa31.99■■■□□ 2.71
CHFR-218ENST00000540963 MTMR4Q9NYA4 1195 aa31.99■■■□□ 2.71
CHFR-218ENST00000540963 MYO9BQ13459 2157 aa31.98■■■□□ 2.71
CHFR-218ENST00000540963 USP38Q8NB14 1042 aa31.98■■■□□ 2.71
CHFR-218ENST00000540963 GAS2L1Q99501 681 aaPredicted RBP31.98■■■□□ 2.71
CHFR-218ENST00000540963 PBX4Q9BYU1 374 aa31.98■■■□□ 2.71
CHFR-218ENST00000540963 KATNBL1Q9H079 304 aa31.98■■■□□ 2.71
CHFR-218ENST00000540963 TTLL1O95922 423 aa31.97■■■□□ 2.71
CHFR-218ENST00000540963 ZFYP08048 801 aaPredicted RBP31.97■■■□□ 2.71
CHFR-218ENST00000540963 CSF2RAP15509 400 aa31.97■■■□□ 2.71
CHFR-218ENST00000540963 SLC4A3P48751 1232 aa31.97■■■□□ 2.71
CHFR-218ENST00000540963 AKNAD1Q5T1N1 836 aa31.97■■■□□ 2.71
CHFR-218ENST00000540963 OSBP2Q969R2 916 aa31.97■■■□□ 2.71
CHFR-218ENST00000540963 CEP95Q96GE4 821 aa31.97■■■□□ 2.71
CHFR-218ENST00000540963 SEZ6LQ9BYH1 1024 aa31.97■■■□□ 2.71
CHFR-218ENST00000540963 CD4P01730 458 aa31.96■■■□□ 2.71
CHFR-218ENST00000540963 CCDC129Q6ZRS4 1044 aa31.96■■■□□ 2.71
CHFR-218ENST00000540963 CCDC144CPQ8IYA2 1237 aa31.96■■■□□ 2.71
CHFR-218ENST00000540963 PLIN4Q96Q06 1357 aa31.95■■■□□ 2.71
CHFR-218ENST00000540963 CTAGE5O15320 804 aa31.95■■■□□ 2.71
CHFR-218ENST00000540963 CABYRO75952 493 aa31.95■■■□□ 2.71
CHFR-218ENST00000540963 IRX5P78411 483 aaPredicted RBP31.95■■■□□ 2.71
CHFR-218ENST00000540963 ATXN2LQ8WWM7 1075 aaKnown RBP31.95■■■□□ 2.71
CHFR-218ENST00000540963 MUC3AQ02505 3323 aa31.95■■■□□ 2.71
CHFR-218ENST00000540963 ZNF365Q70YC5 407 aa31.94■■■□□ 2.7
CHFR-218ENST00000540963 STK11IPQ8N1F8 1099 aa31.94■■■□□ 2.7
CHFR-218ENST00000540963 FAM133AQ8N9E0 248 aa31.94■■■□□ 2.7
CHFR-218ENST00000540963 SLC43A3Q8NBI5 491 aa31.94■■■□□ 2.7
CHFR-218ENST00000540963 MTIF3Q9H2K0 278 aaKnown RBP31.94■■■□□ 2.7
CHFR-218ENST00000540963 ACAD9Q9H845 621 aa31.94■■■□□ 2.7
CHFR-218ENST00000540963 EPB41L4AQ9HCS5 686 aaPredicted RBP31.94■■■□□ 2.7
CHFR-218ENST00000540963 RNF113AO15541 343 aaKnown RBP31.93■■■□□ 2.7
CHFR-218ENST00000540963 GPAA1O43292 621 aa31.93■■■□□ 2.7
CHFR-218ENST00000540963 BMP3P12645 472 aa31.93■■■□□ 2.7
CHFR-218ENST00000540963 TDO2P48775 406 aa31.93■■■□□ 2.7
CHFR-218ENST00000540963 RAB30Q15771 203 aa31.93■■■□□ 2.7
CHFR-218ENST00000540963 HERVK_113Q902F9 699 aa31.93■■■□□ 2.7
CHFR-218ENST00000540963 GPATCH3Q96I76 525 aa31.93■■■□□ 2.7
CHFR-218ENST00000540963 IL23AQ9NPF7 189 aa31.93■■■□□ 2.7
CHFR-218ENST00000540963 TNFRSF10AO00220 468 aa31.92■■■□□ 2.7
CHFR-218ENST00000540963 TNFAIP2Q03169 654 aa31.92■■■□□ 2.7
CHFR-218ENST00000540963 TKFCQ3LXA3 575 aa31.92■■■□□ 2.7
CHFR-218ENST00000540963 NEDD1Q8NHV4 660 aa31.92■■■□□ 2.7
CHFR-218ENST00000540963 PPP1R12CQ9BZL4 782 aa31.92■■■□□ 2.7
CHFR-218ENST00000540963 CHD9Q3L8U1 2897 aa31.91■■■□□ 2.7
CHFR-218ENST00000540963 ASB14A6NK59 587 aa31.91■■■□□ 2.7
CHFR-218ENST00000540963 PBX2P40425 430 aa31.91■■■□□ 2.7
CHFR-218ENST00000540963 STAT2P52630 851 aa31.91■■■□□ 2.7
CHFR-218ENST00000540963 LRRFIP1Q32MZ4 808 aaKnown RBP31.91■■■□□ 2.7
CHFR-218ENST00000540963 SLFN13Q68D06 897 aa31.91■■■□□ 2.7
CHFR-218ENST00000540963 FAM160B2Q86V87 743 aa31.91■■■□□ 2.7
CHFR-218ENST00000540963 CHURC1Q8WUH1 139 aa31.91■■■□□ 2.7
CHFR-218ENST00000540963 MSRAQ9UJ68 235 aa31.91■■■□□ 2.7
CHFR-218ENST00000540963 GRXCR1A8MXD5 290 aa31.9■■■□□ 2.7
CHFR-218ENST00000540963 PATL2C9JE40 543 aaKnown RBP31.9■■■□□ 2.7
CHFR-218ENST00000540963 SMARCA5O60264 1052 aaPredicted RBP31.9■■■□□ 2.7
CHFR-218ENST00000540963 CNTN2Q02246 1040 aa31.9■■■□□ 2.7
CHFR-218ENST00000540963 PPP4R3BQ5MIZ7 849 aa31.9■■■□□ 2.7
CHFR-218ENST00000540963 LRRC47Q8N1G4 583 aaKnown RBP31.9■■■□□ 2.7
CHFR-218ENST00000540963 GMCL1Q96IK5 515 aa31.9■■■□□ 2.7
CHFR-218ENST00000540963 GNEQ9Y223 722 aaKnown RBP31.9■■■□□ 2.7
CHFR-218ENST00000540963 PLA2G6O60733 806 aa31.89■■■□□ 2.7
CHFR-218ENST00000540963 PRDM1O75626 825 aa31.89■■■□□ 2.7
CHFR-218ENST00000540963 ACRP10323 421 aa31.89■■■□□ 2.7
CHFR-218ENST00000540963 PDE4BQ07343 736 aa31.89■■■□□ 2.7
CHFR-218ENST00000540963 NACAP1Q9BZK3 213 aa31.89■■■□□ 2.7
CHFR-218ENST00000540963 A1CFQ9NQ94 594 aaKnown RBP31.89■■■□□ 2.7
CHFR-218ENST00000540963 HOMER2Q9NSB8 354 aa31.89■■■□□ 2.7
CHFR-218ENST00000540963 TMEM232C9JQI7 657 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 APPP05067 770 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 TSPY3P0CV98 308 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 TSPY8P0CW00 308 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 IFNL3Q8IZI9 196 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 HIPK3Q9H422 1215 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 PRDM12Q9H4Q4 367 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 THEGQ9P2T0 379 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 Q9Y3F1 56 aa31.88■■■□□ 2.69
CHFR-218ENST00000540963 GBF1Q92538 1859 aa31.87■■■□□ 2.69
CHFR-218ENST00000540963 LRRC37A2A6NM11 1700 aa31.87■■■□□ 2.69
CHFR-218ENST00000540963 ASTN1O14525 1302 aa31.87■■■□□ 2.69
CHFR-218ENST00000540963 ZEB2O60315 1214 aa31.87■■■□□ 2.69
CHFR-218ENST00000540963 FGBP02675 491 aa31.87■■■□□ 2.69
CHFR-218ENST00000540963 SLC3A2P08195 630 aaKnown RBP31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms