RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 LRRFIP2Q9Y608 721 aaKnown RBP5.79□□□□□ -1.48
SNHG1-214ENST00000540865 USP3Q9Y6I4 520 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 ATRNL1Q5VV63 1379 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 MROH5Q6ZUA9 1318 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 TRIM75PA6NK02 468 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 ATG7O95352 703 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 PABPC4Q13310 644 aaKnown RBP eCLIP5.78□□□□□ -1.48
SNHG1-214ENST00000540865 FKBP5Q13451 457 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-214ENST00000540865 SHHQ15465 462 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 EPHA10Q5JZY3 1008 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 TREML2Q5T2D2 321 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 PRICKLE2Q7Z3G6 844 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 SOCS4Q8WXH5 440 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 ARAP2Q8WZ64 1704 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 CNTNAP3BQ96NU0 1288 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 CNTNAP3Q9BZ76 1288 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 PUS3Q9BZE2 481 aaKnown RBP5.78□□□□□ -1.48
SNHG1-214ENST00000540865 USP40Q9NVE5 1235 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 MORF4L1Q9UBU8 362 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 PRKAG2Q9UGJ0 569 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 DAGLAQ9Y4D2 1042 aa5.78□□□□□ -1.48
SNHG1-214ENST00000540865 KIF16BQ96L93 1317 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 APAF1O14727 1248 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 ENTPD3O75355 529 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 ZKSCAN1P17029 563 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-214ENST00000540865 RHOQP17081 205 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 CYP2B6P20813 491 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 RNF144AP50876 292 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-214ENST00000540865 SMTNP53814 917 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 SEC13P55735 322 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 CACNB2Q08289 660 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-214ENST00000540865 MAP3K12Q12852 859 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 TWISTNBQ3B726 338 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-214ENST00000540865 BEND3Q5T5X7 828 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 TMEM164Q5U3C3 297 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 ZFPM1Q8IX07 1006 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 GPR161Q8N6U8 529 aaKnown RBP5.77□□□□□ -1.49
SNHG1-214ENST00000540865 WDR66Q8TBY9 1149 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 FAM200AQ8TCP9 573 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 ATXN2LQ8WWM7 1075 aaKnown RBP5.77□□□□□ -1.49
SNHG1-214ENST00000540865 IDI2Q9BXS1 227 aa5.77□□□□□ -1.49
SNHG1-214ENST00000540865 RBM19Q9Y4C8 960 aaKnown RBP5.77□□□□□ -1.49
SNHG1-214ENST00000540865 SYNGAP1Q96PV0 1343 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 MYBBP1AQ9BQG0 1328 aaKnown RBP5.76□□□□□ -1.49
SNHG1-214ENST00000540865 ALPK3Q96L96 1907 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 A6NJY4 79 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 GRM8O00222 908 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 PDE8BO95263 885 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 IFIT1P09914 478 aaKnown RBP5.76□□□□□ -1.49
SNHG1-214ENST00000540865 CCND3P30281 292 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-214ENST00000540865 MAPK4P31152 587 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 PHKA2P46019 1235 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 RGS3P49796 1198 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 POU4F2Q12837 409 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 PDE3AQ14432 1141 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 METTL24Q5JXM2 366 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 C9orf50Q5SZB4 431 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 XP32Q5T750 250 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 SVOPQ8N4V2 548 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 VGLL2Q8N8G2 317 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 USP38Q8NB14 1042 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 ZNF280CQ8ND82 737 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 GPRC5AQ8NFJ5 357 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 USP6NLQ92738 828 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 TSR2Q969E8 191 aaKnown RBP5.76□□□□□ -1.49
SNHG1-214ENST00000540865 ZSCAN10Q96SZ4 725 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-214ENST00000540865 HINFPQ9BQA5 517 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 GRIP2Q9C0E4 1043 aa5.76□□□□□ -1.49
SNHG1-214ENST00000540865 SENP6Q9GZR1 1112 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-214ENST00000540865 ASCC2Q9H1I8 757 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-214ENST00000540865 DNMT3AQ9Y6K1 912 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-214ENST00000540865 XIRP2A4UGR9 3374 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 DNM1LO00429 736 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 BACH1O14867 736 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 MSCO60682 206 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 LDHBP07195 334 aaKnown RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 FGFR2P21802 821 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 IRS1P35568 1242 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 ZEB1P37275 1124 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 RGS2P41220 211 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 EPHA4P54764 986 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 RTP1P59025 263 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 SPP2Q13103 211 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 ELOAQ14241 798 aaKnown RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 PUM3Q15397 648 aaKnown RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 ZNF385CQ66K41 422 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 TMEM214Q6NUQ4 689 aaKnown RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 LYSMD3Q7Z3D4 306 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 ZSCAN29Q8IWY8 852 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 LPAR1Q92633 364 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 ASB2Q96Q27 587 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 UHRF1Q96T88 793 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 C1QTNF1Q9BXJ1 281 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 TSPAN10Q9H1Z9 355 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 C9orf78Q9NZ63 289 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-214ENST00000540865 SPEF2Q9C093 1822 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 MYH3P11055 1940 aa5.75□□□□□ -1.49
SNHG1-214ENST00000540865 DDTLA6NHG4 134 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-214ENST00000540865 F6X3S4 739 aa5.74□□□□□ -1.49
SNHG1-214ENST00000540865 ALDH1L1O75891 902 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms