RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 MYH8P13535 1937 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
LGR5-203ENST00000540815 ZSCAN26Q16670 478 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 SPATA1Q5VX52 437 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 HOMER1Q86YM7 354 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 CERS5Q8N5B7 392 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 DNAI1Q9UI46 699 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 MTMR7Q9Y216 660 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 ADAMTSL1Q8N6G6 1762 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 PPP1R3GB7ZBB8 358 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 RIMBP2O15034 1052 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 FANCGO15287 622 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
LGR5-203ENST00000540815 GOLGA8HP0CJ92 632 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
LGR5-203ENST00000540815 OAS2P29728 719 aaKnown RBP12.78□□□□□ -0.36
LGR5-203ENST00000540815 LMAN1P49257 510 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 COL23A1Q86Y22 540 aaPredicted RBP12.78□□□□□ -0.36
LGR5-203ENST00000540815 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
LGR5-203ENST00000540815 CEP95Q96GE4 821 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 PPP1R13BQ96KQ4 1090 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
LGR5-203ENST00000540815 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 LAD1O00515 517 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 CCP110O43303 1012 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 TXLNAP40222 546 aa12.78□□□□□ -0.36
LGR5-203ENST00000540815 SRGNP10124 158 aa12.77□□□□□ -0.36
LGR5-203ENST00000540815 NPR1P16066 1061 aa12.77□□□□□ -0.36
LGR5-203ENST00000540815 NOP2P46087 812 aaKnown RBP12.77□□□□□ -0.36
LGR5-203ENST00000540815 HSP90AA4PQ58FG1 418 aa12.77□□□□□ -0.36
LGR5-203ENST00000540815 DRC1Q96MC2 740 aa12.77□□□□□ -0.36
LGR5-203ENST00000540815 MXD3Q9BW11 206 aa12.77□□□□□ -0.36
LGR5-203ENST00000540815 A0A1B0GTH6 734 aa12.77□□□□□ -0.37
LGR5-203ENST00000540815 TUBB4AP04350 444 aa12.77□□□□□ -0.37
LGR5-203ENST00000540815 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
LGR5-203ENST00000540815 NR1I3Q14994 352 aa12.77□□□□□ -0.37
LGR5-203ENST00000540815 INF2Q27J81 1249 aa12.77□□□□□ -0.37
LGR5-203ENST00000540815 SPECC1LQ69YQ0 1117 aa12.77□□□□□ -0.37
LGR5-203ENST00000540815 DTHD1Q6ZMT9 781 aa12.77□□□□□ -0.37
LGR5-203ENST00000540815 NLGN1Q8N2Q7 840 aa12.77□□□□□ -0.37
LGR5-203ENST00000540815 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
LGR5-203ENST00000540815 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.37
LGR5-203ENST00000540815 URI1O94763 535 aaPredicted RBP12.76□□□□□ -0.37
LGR5-203ENST00000540815 PRPHP41219 470 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 NAPAP54920 295 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 GABPAQ06546 454 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 CDKAL1Q5VV42 579 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 TMCO3Q6UWJ1 677 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 FCHSD1Q86WN1 690 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 MTRQ99707 1265 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 CARD6Q9BX69 1037 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 DDX4Q9NQI0 724 aaKnown RBP12.76□□□□□ -0.37
LGR5-203ENST00000540815 APTXQ7Z2E3 356 aaKnown RBP12.76□□□□□ -0.37
LGR5-203ENST00000540815 KRT25Q7Z3Z0 450 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 BLZF1Q9H2G9 400 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 RMND1Q9NWS8 449 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 SEC63Q9UGP8 760 aaKnown RBP12.76□□□□□ -0.37
LGR5-203ENST00000540815 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
LGR5-203ENST00000540815 GNA11P29992 359 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 KLHL10Q6JEL2 608 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 TMEM139Q8IV31 216 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 UBXN4Q92575 508 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 STAMQ92783 540 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 ZC3H12CQ9C0D7 883 aaKnown RBP12.75□□□□□ -0.37
LGR5-203ENST00000540815 TMEM60Q9H2L4 133 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 C6orf50Q9HD87 102 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 DISC1Q9NRI5 854 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.75□□□□□ -0.372e-7■■■□□ 18.9
LGR5-203ENST00000540815 IGKV6D-41A0A0C4DH26 115 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 ALDH1B1P30837 517 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 STAT6P42226 847 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 SMYD4Q8IYR2 804 aaPredicted RBP12.75□□□□□ -0.37
LGR5-203ENST00000540815 CCSER1Q9C0I3 900 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 RIOX1Q9H6W3 641 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 MTMR4Q9NYA4 1195 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 MYO3BQ8WXR4 1341 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 SMCO2A6NFE2 343 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 USP17L5A8MUK1 530 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 F8W031 263 aaPredicted RBP12.75□□□□□ -0.37
LGR5-203ENST00000540815 hCG_1984214I3L0E3 225 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 RPN1P04843 607 aaKnown RBP12.75□□□□□ -0.37
LGR5-203ENST00000540815 STX17P56962 302 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 PICALMQ13492 652 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
LGR5-203ENST00000540815 ZNF658Q5TYW1 1059 aaPredicted RBP12.75□□□□□ -0.37
LGR5-203ENST00000540815 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
LGR5-203ENST00000540815 CTAGE1Q96RT6 745 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 SWAP70Q9UH65 585 aa12.75□□□□□ -0.37
LGR5-203ENST00000540815 ESYT2A0FGR8 921 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 ARHGAP6O43182 974 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 PDHBP11177 359 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 CDC25AP30304 524 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 PDE6BP35913 854 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 NONOQ15233 471 aaKnown RBP eCLIP12.74□□□□□ -0.37
LGR5-203ENST00000540815 DOK7Q18PE1 504 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 ASPRV1Q53RT3 343 aa12.74□□□□□ -0.37
LGR5-203ENST00000540815 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms