RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 RILPL1Q5EBL4 403 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 ANO1Q5XXA6 986 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 TYW1BQ6NUM6 668 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 HEATR3Q7Z4Q2 680 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 SCYL3Q8IZE3 742 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 PCDHA4Q9UN74 947 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 PNMA6FA0A0J9YX94 578 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 ESYT2A0FGR8 921 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 INPP5BP32019 993 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 TTLL12Q14166 644 aaPredicted RBP16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 PPP1R18Q6NYC8 613 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 BLIDQ8IZY5 108 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 FTOQ9C0B1 505 aaKnown RBP eCLIP16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 ZMYND12Q9H0C1 365 aa16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.35■□□□□ 0.21
CYB561A3-216ENST00000540755 USP17L10C9JJH3 530 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 ZBTB5O15062 677 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 NF2P35240 595 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 SLC16A2P36021 539 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 NOL9Q5SY16 702 aaKnown RBP16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 LDLRAD1Q5T700 205 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 KCNG4Q8TDN1 519 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 WRNIP1Q96S55 665 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 FZD1Q9UP38 647 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 CLIC4Q9Y696 253 aa16.34■□□□□ 0.21
CYB561A3-216ENST00000540755 OTOFQ9HC10 1997 aa16.33■□□□□ 0.21
CYB561A3-216ENST00000540755 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 M0R2N6 131 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 PLA2G6O60733 806 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 GNA11P29992 359 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 RGS19P49795 217 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 NAPAP54920 295 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 STK38Q15208 465 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 KIAA1755Q5JYT7 1200 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 NUP88Q99567 741 aaPredicted RBP16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 KIAA1683Q9H0B3 1180 aa16.33■□□□□ 0.2
CYB561A3-216ENST00000540755 TOB1P50616 345 aaPredicted RBP16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 PRKG1Q13976 671 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 SF3A1Q15459 793 aaKnown RBP16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 SYDE2Q5VT97 1194 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 SPICE1Q8N0Z3 855 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 LPAR1Q92633 364 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 PGBD1Q96JS3 809 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 FEZ1Q99689 392 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 NOL7Q9UMY1 257 aaKnown RBP16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 HTTP42858 3142 aa16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 TNRC18O15417 2968 aaPredicted RBP16.32■□□□□ 0.2
CYB561A3-216ENST00000540755 GOLGA6L4A6NEF3 574 aa16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 SMCO2A6NFE2 343 aa16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 SPTLC2O15270 562 aa16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 TRAPPC10P48553 1259 aa16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 STAT2P52630 851 aa16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 PTPAQ15257 358 aa16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 EARS2Q5JPH6 523 aaKnown RBP16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 FAM83BQ5T0W9 1011 aa16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 CCDC84Q86UT8 332 aaPredicted RBP16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 MORC2Q9Y6X9 1032 aaPredicted RBP16.31■□□□□ 0.2
CYB561A3-216ENST00000540755 WDR46O15213 610 aaKnown RBP16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 PPP1R11O60927 126 aaPredicted RBP16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 PPP6R2O75170 966 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 PTPRAP18433 802 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 TM4SF4P48230 202 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 QRICH1Q2TAL8 776 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 FAM160B2Q86V87 743 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 CHURC1Q8WUH1 139 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 ZKSCAN4Q969J2 545 aaPredicted RBP16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 PCDHA6Q9UN73 950 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 PCDHA8Q9Y5H6 950 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 PARP14Q460N5 1801 aa16.3■□□□□ 0.2
CYB561A3-216ENST00000540755 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 USP14P54578 494 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 IKQ13123 557 aaPredicted RBP16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 SPRYD7Q5W111 196 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 COA7Q96BR5 231 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 CLMNQ96JQ2 1002 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 PRR12Q9ULL5 1215 aa16.29■□□□□ 0.2
CYB561A3-216ENST00000540755 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms