RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ASB14A6NK59 587 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 SMIM22K7EJ46 135 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 MCCP23508 829 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 NOVP48745 357 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 GPATCH4Q5T3I0 446 aaKnown RBP12.22□□□□□ -0.45
CDCA3-208ENST00000540683 CWC27Q6UX04 472 aaKnown RBP12.22□□□□□ -0.45
CDCA3-208ENST00000540683 DGKHQ86XP1 1220 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 C7orf61Q8IZ16 206 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 DIS3LQ8TF46 1054 aaKnown RBP12.22□□□□□ -0.45
CDCA3-208ENST00000540683 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 TSEN34Q9BSV6 310 aaKnown RBP12.22□□□□□ -0.45
CDCA3-208ENST00000540683 SENP6Q9GZR1 1112 aaPredicted RBP12.22□□□□□ -0.45
CDCA3-208ENST00000540683 ABHD16BQ9H3Z7 469 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 PLXNA1Q9UIW2 1896 aa12.22□□□□□ -0.45
CDCA3-208ENST00000540683 FRMPD3Q5JV73 1810 aa12.21□□□□□ -0.45
CDCA3-208ENST00000540683 SLC4A3P48751 1232 aa12.21□□□□□ -0.45
CDCA3-208ENST00000540683 TRDNQ13061 729 aa12.21□□□□□ -0.45
CDCA3-208ENST00000540683 TRAF1Q13077 416 aa12.21□□□□□ -0.45
CDCA3-208ENST00000540683 SEZ6LQ9BYH1 1024 aa12.21□□□□□ -0.45
CDCA3-208ENST00000540683 RAVER2Q9HCJ3 691 aaKnown RBP12.21□□□□□ -0.45
CDCA3-208ENST00000540683 XPNPEP3Q9NQH7 507 aa12.21□□□□□ -0.45
CDCA3-208ENST00000540683 ADD3Q9UEY8 706 aaKnown RBP12.21□□□□□ -0.45
CDCA3-208ENST00000540683 MROH7Q68CQ1 1323 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 DNAJC25-GNG10A0A024R161 153 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 MOXD2PA6NHM9 499 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 IGHDP01880 384 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 ICAM1P05362 532 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 PGK2P07205 417 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 VPS53Q5VIR6 699 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 C1orf53Q5VUE5 145 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 BTNL9Q6UXG8 535 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 PCSK9Q8NBP7 692 aaKnown RBP12.2□□□□□ -0.46
CDCA3-208ENST00000540683 UBAC1Q9BSL1 405 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 IL17RBQ9NRM6 502 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 RNF146Q9NTX7 359 aa12.2□□□□□ -0.46
CDCA3-208ENST00000540683 DUSP11O75319 330 aaKnown RBP12.19□□□□□ -0.46
CDCA3-208ENST00000540683 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-208ENST00000540683 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
CDCA3-208ENST00000540683 GPR153Q6NV75 609 aa12.19□□□□□ -0.46
CDCA3-208ENST00000540683 ZNF589Q86UQ0 364 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-208ENST00000540683 TRERF1Q96PN7 1200 aa12.19□□□□□ -0.46
CDCA3-208ENST00000540683 KAT14Q9H8E8 782 aa12.19□□□□□ -0.46
CDCA3-208ENST00000540683 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
CDCA3-208ENST00000540683 CCPG1Q9ULG6 757 aa12.19□□□□□ -0.46
CDCA3-208ENST00000540683 ERICH2A1L162 156 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 FOXP2O15409 715 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 ZEB2O60315 1214 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 ALAS1P13196 640 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 FXR1P51114 621 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDCA3-208ENST00000540683 LRRC41Q15345 812 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 GJC2Q5T442 439 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-208ENST00000540683 TTC22Q5TAA0 569 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 SYDE2Q5VT97 1194 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 KCTD1Q719H9 257 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 TRPV1Q8NER1 839 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 UBE2OQ9C0C9 1292 aaKnown RBP12.18□□□□□ -0.46
CDCA3-208ENST00000540683 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 ZHX1Q9UKY1 873 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-208ENST00000540683 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 PHF24Q9UPV7 400 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 RIPK3Q9Y572 518 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 LAMA4Q16363 1823 aa12.18□□□□□ -0.46
CDCA3-208ENST00000540683 WDR19Q8NEZ3 1342 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 TRIOBPQ9H2D6 2365 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 HAND2P61296 217 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 ACVR2BQ13705 512 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 LRRC26Q2I0M4 334 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 BRDTQ58F21 947 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-208ENST00000540683 CCDC174Q6PII3 467 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 SLC39A5Q6ZMH5 540 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 TDHQ8IZJ6 230 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 GLT1D1Q96MS3 346 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 GDF15Q99988 308 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 RANBP17Q9H2T7 1088 aaKnown RBP12.17□□□□□ -0.46
CDCA3-208ENST00000540683 PRO3102Q9H379 93 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-208ENST00000540683 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 TACC3Q9Y6A5 838 aa12.17□□□□□ -0.46
CDCA3-208ENST00000540683 NMT2O60551 498 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 CABYRO75952 493 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 ZNF865P0CJ78 1059 aaPredicted RBP12.16□□□□□ -0.46
CDCA3-208ENST00000540683 PDHBP11177 359 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 CST5P28325 142 aaPredicted RBP12.16□□□□□ -0.46
CDCA3-208ENST00000540683 RTP1P59025 263 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 ZNF543Q08ER8 600 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 PRAMEF19Q5SWL8 479 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 KIAA1211Q6ZU35 1233 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 ARMCX2Q7L311 632 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 RALYLQ86SE5 291 aaKnown RBP12.16□□□□□ -0.46
CDCA3-208ENST00000540683 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 PNMA1Q8ND90 353 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 ANKS1AQ92625 1134 aa12.16□□□□□ -0.46
CDCA3-208ENST00000540683 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
CDCA3-208ENST00000540683 A1CFQ9NQ94 594 aaKnown RBP12.16□□□□□ -0.46
CDCA3-208ENST00000540683 ZMYND8Q9ULU4 1186 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms