RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 PRR12Q9ULL5 1215 aa24.73■■□□□ 1.55
CHFR-217ENST00000540537 AKR1A1P14550 325 aa24.72■■□□□ 1.55
CHFR-217ENST00000540537 SYN1P17600 705 aa24.72■■□□□ 1.55
CHFR-217ENST00000540537 PDE4AP27815 886 aa24.72■■□□□ 1.55
CHFR-217ENST00000540537 BMP8BP34820 402 aa24.72■■□□□ 1.55
CHFR-217ENST00000540537 LRRC41Q15345 812 aa24.72■■□□□ 1.55
CHFR-217ENST00000540537 CCDC96Q2M329 555 aa24.72■■□□□ 1.55
CHFR-217ENST00000540537 RASGRP2Q7LDG7 609 aa24.72■■□□□ 1.55
CHFR-217ENST00000540537 HOMER2Q9NSB8 354 aa24.72■■□□□ 1.55
CHFR-217ENST00000540537 ZNF213O14771 459 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 ESR2Q92731 530 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 AGBL1Q96MI9 1066 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 TTC14Q96N46 770 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 DSCC1Q9BVC3 393 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 XPNPEP3Q9NQH7 507 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 RNF146Q9NTX7 359 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 PCDH10Q9P2E7 1040 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 MTMR7Q9Y216 660 aa24.71■■□□□ 1.55
CHFR-217ENST00000540537 SNAI1O95863 264 aaPredicted RBP24.7■■□□□ 1.54
CHFR-217ENST00000540537 ATN1P54259 1190 aaPredicted RBP24.7■■□□□ 1.54
CHFR-217ENST00000540537 IRX6P78412 446 aaPredicted RBP24.7■■□□□ 1.54
CHFR-217ENST00000540537 BTNL9Q6UXG8 535 aa24.7■■□□□ 1.54
CHFR-217ENST00000540537 FGD4Q96M96 766 aa24.7■■□□□ 1.54
CHFR-217ENST00000540537 MCM3APO60318 1980 aa24.7■■□□□ 1.54
CHFR-217ENST00000540537 NEDD4P46934 1319 aa24.69■■□□□ 1.54
CHFR-217ENST00000540537 MYCNP04198 464 aaPredicted RBP24.69■■□□□ 1.54
CHFR-217ENST00000540537 MAGEA10P43363 369 aaPredicted RBP24.69■■□□□ 1.54
CHFR-217ENST00000540537 TTC22Q5TAA0 569 aa24.69■■□□□ 1.54
CHFR-217ENST00000540537 RTP1P59025 263 aa24.68■■□□□ 1.54
CHFR-217ENST00000540537 CCDC174Q6PII3 467 aa24.68■■□□□ 1.54
CHFR-217ENST00000540537 RNF180Q86T96 592 aa24.68■■□□□ 1.54
CHFR-217ENST00000540537 TRERF1Q96PN7 1200 aa24.68■■□□□ 1.54
CHFR-217ENST00000540537 RANBP17Q9H2T7 1088 aaKnown RBP24.68■■□□□ 1.54
CHFR-217ENST00000540537 A1CFQ9NQ94 594 aaKnown RBP24.68■■□□□ 1.54
CHFR-217ENST00000540537 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.68■■□□□ 1.54
CHFR-217ENST00000540537 ZHX1Q9UKY1 873 aaPredicted RBP24.68■■□□□ 1.54
CHFR-217ENST00000540537 FAM184BQ9ULE4 1060 aa24.68■■□□□ 1.54
CHFR-217ENST00000540537 POTEB2H3BUK9 544 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 PDHBP11177 359 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 ALAS1P13196 640 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 GSPT1P15170 499 aaKnown RBP24.67■■□□□ 1.54
CHFR-217ENST00000540537 SNAP25P60880 206 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 SNX17Q15036 470 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 SYDE2Q5VT97 1194 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 TTBK2Q6IQ55 1244 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 SLC39A5Q6ZMH5 540 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 FAM133AQ8N9E0 248 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 CTNNA3Q9UI47 895 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 PHF24Q9UPV7 400 aa24.67■■□□□ 1.54
CHFR-217ENST00000540537 PGK1P00558 417 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 ICAM1P05362 532 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 ADCYAP1R1P41586 468 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 CNTN2Q02246 1040 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 ACVR2BQ13705 512 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 IMMTQ16891 758 aaKnown RBP24.66■■□□□ 1.54
CHFR-217ENST00000540537 CCDC178Q5BJE1 867 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 ARMCX2Q7L311 632 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 DGKHQ86XP1 1220 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 ABHD16BQ9H3Z7 469 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 CCPG1Q9ULG6 757 aa24.66■■□□□ 1.54
CHFR-217ENST00000540537 FRMPD2Q68DX3 1309 aaPredicted RBP24.65■■□□□ 1.54
CHFR-217ENST00000540537 ADAMTS4O75173 837 aa24.65■■□□□ 1.54
CHFR-217ENST00000540537 SNHG28P0DPA3 235 aa24.65■■□□□ 1.54
CHFR-217ENST00000540537 SLC16A2P36021 539 aa24.65■■□□□ 1.54
CHFR-217ENST00000540537 C1orf53Q5VUE5 145 aa24.65■■□□□ 1.54
CHFR-217ENST00000540537 LENG1Q96BZ8 264 aaPredicted RBP24.65■■□□□ 1.54
CHFR-217ENST00000540537 GPCPD1Q9NPB8 672 aa24.65■■□□□ 1.54
CHFR-217ENST00000540537 RAD50Q92878 1312 aa24.64■■□□□ 1.54
CHFR-217ENST00000540537 ZNF543Q08ER8 600 aa24.64■■□□□ 1.54
CHFR-217ENST00000540537 IQCA1Q86XH1 822 aa24.64■■□□□ 1.54
CHFR-217ENST00000540537 CCDC144CPQ8IYA2 1237 aa24.64■■□□□ 1.54
CHFR-217ENST00000540537 ATP11BQ9Y2G3 1177 aa24.64■■□□□ 1.54
CHFR-217ENST00000540537 SZT2Q5T011 3432 aa24.64■■□□□ 1.53
CHFR-217ENST00000540537 KDM4AO75164 1064 aa24.63■■□□□ 1.53
CHFR-217ENST00000540537 DUSP11O75319 330 aaKnown RBP24.63■■□□□ 1.53
CHFR-217ENST00000540537 MUM1L1Q5H9M0 696 aa24.63■■□□□ 1.53
CHFR-217ENST00000540537 FERMT2Q96AC1 680 aa24.63■■□□□ 1.53
CHFR-217ENST00000540537 ZKSCAN3Q9BRR0 538 aa24.63■■□□□ 1.53
CHFR-217ENST00000540537 TSEN34Q9BSV6 310 aaKnown RBP24.63■■□□□ 1.53
CHFR-217ENST00000540537 UBE2OQ9C0C9 1292 aaKnown RBP24.63■■□□□ 1.53
CHFR-217ENST00000540537 IL25Q9H293 177 aa24.63■■□□□ 1.53
CHFR-217ENST00000540537 CYP39A1Q9NYL5 469 aa24.63■■□□□ 1.53
CHFR-217ENST00000540537 PNMA2Q9UL42 364 aa24.63■■□□□ 1.53
CHFR-217ENST00000540537 LAMA3Q16787 3333 aa24.63■■□□□ 1.53
CHFR-217ENST00000540537 SYNRGQ9UMZ2 1314 aa24.62■■□□□ 1.53
CHFR-217ENST00000540537 SOWAHBA6NEL2 793 aa24.62■■□□□ 1.53
CHFR-217ENST00000540537 ASB14A6NK59 587 aa24.62■■□□□ 1.53
CHFR-217ENST00000540537 KATNBL1Q9H079 304 aa24.62■■□□□ 1.53
CHFR-217ENST00000540537 PRKAG2Q9UGJ0 569 aa24.62■■□□□ 1.53
CHFR-217ENST00000540537 B4E1Z4 1266 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 CCDC144BQ3MJ40 725 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 TRIM60Q495X7 471 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 GPATCH4Q5T3I0 446 aaKnown RBP24.61■■□□□ 1.53
CHFR-217ENST00000540537 TDHQ8IZJ6 230 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 KLHDC9Q8NEP7 349 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 ANKS1AQ92625 1134 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 KRT23Q9C075 422 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 CNNM2Q9H8M5 875 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 LCTP09848 1927 aa24.61■■□□□ 1.53
CHFR-217ENST00000540537 A0A1W2PQ45 241 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms